Centre for Genomics and Personalised Health, Queensland University of Technology, Brisbane, Queensland, Australia.
Translational Research Institute, Brisbane, Queensland, Australia.
Transfusion. 2022 May;62(5):1110-1120. doi: 10.1111/trf.16873. Epub 2022 Apr 11.
Red blood cell (RBC) membrane-associated blood group systems are clinically significant. Alloimmunisation is a persistent risk associated with blood transfusion owing to the antigen polymorphisms among these RBC-associated blood groups. Next-generation sequencing (NGS) offers an opportunity to characterize the blood group variant profile of a given individual. Australia comprises a large multiethnic population where most blood donors are Caucasian and blood group variants remain poorly studied among Indigenous Australians. In this study, we focused on the Tiwi Islanders, who have lived in relative isolation for thousands of years.
We predicted the blood group phenotype profiles in the Tiwi (457) and 1000 Genomes Phase 3 (1KGP3-2504) cohort individuals using RBCeq (https://www.rbceq.org/). The predicted phenotype prevalence was compared with the previous literature report.
We report, for the first time, comprehensive blood group profiles corresponding to the 35 known blood group systems among the Indigenous Tiwi islander population and identify possible novel antigen variants therein. Our results demonstrate that the genetic makeup of the Tiwi participants is distinct from that of other populations, with a low prevalence of LU (Au[a-b+]) and ABO (A2) and D+C+c+E+e- phenotype, an absence of Diego blood group variants, and a unique RHD (DIII type4) variant.
Our results may contribute to the development of a database of predicted phenotype donors among the Tiwi population and aid in improving transfusion safety for the ~2800 Tiwi people and the ~800,000 other Indigenous Australians throughout the nation.
红细胞(RBC)膜相关血型系统具有重要的临床意义。由于这些 RBC 相关血型群体中的抗原多态性,同种免疫是输血相关的持续风险。下一代测序(NGS)提供了一个机会来描述特定个体的血型变异体谱。澳大利亚是一个多民族人口众多的国家,大多数献血者是白种人,而在澳大利亚原住民中,血型变异体的研究仍然很差。在这项研究中,我们关注的是 Tiwi 岛民,他们已经相对孤立地生活了数千年。
我们使用 RBCeq(https://www.rbceq.org/)预测了 Tiwi(457)和 1000 基因组计划第三阶段(1KGP3-2504)队列个体的血型表型谱。预测的表型流行率与之前的文献报告进行了比较。
我们首次报告了土著 Tiwi 岛民群体中 35 个已知血型系统的全面血型谱,并在其中确定了可能的新型抗原变异体。我们的结果表明,Tiwi 参与者的基因构成与其他群体不同,LU(Au[a-b+])和 ABO(A2)和 D+C+c+E+e-表型的流行率较低,Diego 血型变异体缺失,以及独特的 RHD(DIII type4)变异体。
我们的结果可能有助于在 Tiwi 人群中开发预测表型供体数据库,并有助于提高全国约 2800 名 Tiwi 人和约 80 万其他澳大利亚原住民的输血安全性。