Center for Computational Toxicology and Exposure, U.S. Environmental Protection Agency, Research Triangle Park, North Carolina, USA.
Health and Environmental Sciences Institute, Washington, District of Columbia, USA.
Toxicol Sci. 2022 Jun 28;188(1):4-16. doi: 10.1093/toxsci/kfac041.
There is growing recognition across broad sectors of the scientific community that use of genomic biomarkers has the potential to reduce the need for conventional rodent carcinogenicity studies of industrial chemicals, agrochemicals, and pharmaceuticals through a weight-of-evidence approach. These biomarkers fall into 2 major categories: (1) sets of gene transcripts that can identify distinct tumorigenic mechanisms of action; and (2) cancer driver gene mutations indicative of rapidly expanding growth-advantaged clonal cell populations. This call-to-action article describes a collaborative approach launched to develop and qualify biomarker gene expression panels that measure widely accepted molecular pathways linked to tumorigenesis and their activation levels to predict tumorigenic doses of chemicals from short-term exposures. Growing evidence suggests that application of such biomarker panels in short-term exposure rodent studies can identify both tumorigenic hazard and tumorigenic activation levels for chemical-induced carcinogenicity. In the future, this approach will be expanded to include methodologies examining mutations in key cancer driver gene mutation hotspots as biomarkers of both genotoxic and nongenotoxic chemical tumor risk. Analytical, technical, and biological validation studies of these complementary genomic tools are being undertaken by multisector and multidisciplinary collaborative teams within the Health and Environmental Sciences Institute. Success from these efforts will facilitate the transition from current heavy reliance on conventional 2-year rodent carcinogenicity studies to more rapid animal- and resource-sparing approaches for mechanism-based carcinogenicity evaluation supporting internal and regulatory decision-making.
科学界的许多领域越来越认识到,通过综合证据的方法,使用基因组生物标志物有可能减少对工业化学品、农用化学品和药物进行传统的啮齿动物致癌性研究的必要性。这些生物标志物分为两大类:(1) 可以识别不同致癌作用机制的一组基因转录本;(2) 癌症驱动基因突变,表明快速扩张的具有生长优势的克隆细胞群体。这篇行动呼吁文章描述了一种合作方法,旨在开发和鉴定生物标志物基因表达谱,以测量与肿瘤发生及其激活水平相关的广泛接受的分子途径,从而预测化学物质从短期暴露到致癌剂量。越来越多的证据表明,在短期暴露啮齿动物研究中应用此类生物标志物谱可以识别化学致癌性的致癌危害和致癌激活水平。在未来,这种方法将扩展到包括检查关键癌症驱动基因突变热点的突变作为遗传毒性和非遗传毒性化学肿瘤风险的生物标志物的方法。健康与环境科学研究所内的多部门和多学科合作团队正在对这些互补的基因组工具进行分析、技术和生物学验证研究。这些努力的成功将有助于从当前对传统的 2 年啮齿动物致癌性研究的高度依赖过渡到更快速的基于机制的致癌性评估的动物和资源节约方法,为内部和监管决策提供支持。