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sp. nov.,从患有脂肪肝疾病的鸡中分离得到。

sp. nov., isolated from chickens with spotty liver disease.

机构信息

School of Science, RMIT University, Bundoora West Campus, Bundoora, VIC, Australia.

Scolexia Pty Ltd., Moonee Ponds, VIC, Australia.

出版信息

Int J Syst Evol Microbiol. 2022 Apr;72(4). doi: 10.1099/ijsem.0.005314.

Abstract

A novel species of was isolated from bile samples of chickens with spotty liver disease in Australia, making it the second novel species isolated from chickens with the disease, after was isolated and described in 2016. Six independently derived isolates were obtained. They were Gram-stain-negative, microaerobic, catalase-positive, oxidase-positive and urease-negative. Unlike most other species of the genus , more than half of the tested strains of this novel species hydrolysed hippurate and most of them could not reduce nitrate. Distinct from , many of the isolates were sensitive to 2,3,5-triphenyltetrazolium chloride (0.04%) and metronidazole (4 mg ml), and all strains were sensitive to nalidixic acid. Phylogenetic analysis using 16S rRNA and gene sequences demonstrated that the strains formed a robust clade that was clearly distinct from recognized species. Whole genome sequence analysis of the strains showed that the average nucleotide identity and the genome blast distance phylogeny values compared to other species were less than 86 and 66%, respectively, which are below the cut-off values generally recognized for isolates of the same species. The genome of the novel species has a DNA G+C content of 30.6 mol%, while that of is 27.9 mol%. Electron microscopy showed that the cells were spiral-shaped, with bipolar unsheathed flagella. The protein spectra generated from matrix-assisted laser desorption/ionization time of flight analysis demonstrated that they are different from the most closely related species. These data indicate that the isolates belong to a novel species, for which the name sp. nov. is proposed. The type strain is VicNov18 (=ATCC TSD-231=NCTC 14611).

摘要

从澳大利亚患有斑驳肝病的鸡的胆汁样本中分离出一种新型的 ,这使其成为继 2016 年分离并描述后第二种从患有该疾病的鸡中分离出的新型 。获得了六个独立衍生的分离株。它们革兰氏染色阴性,微需氧,过氧化氢酶阳性,氧化酶阳性,脲酶阴性。与该属的大多数其他物种不同,这种新型物种的一半以上的测试菌株水解马尿酸,并且大多数菌株不能还原硝酸盐。与 不同,许多分离株对 2,3,5-三苯基氯化四氮唑(0.04%)和甲硝唑(4 mg ml)敏感,所有菌株对萘啶酸敏感。使用 16S rRNA 和 基因序列进行的系统发育分析表明,这些菌株形成了一个稳健的分支,与公认的 物种明显不同。对这些菌株的全基因组序列分析表明,与其他 物种相比,平均核苷酸同一性和基因组爆炸距离系统发育值分别小于 86%和 66%,低于通常用于同一物种分离株的截止值。新型物种的基因组具有 30.6 mol%的 DNA G+C 含量,而 则为 27.9 mol%。电子显微镜显示细胞呈螺旋形,具有双极无鞘鞭毛。基质辅助激光解吸/电离飞行时间分析生成的蛋白质图谱表明,它们与最密切相关的 物种不同。这些数据表明,这些分离株属于一种新型的 ,建议将其命名为 VicNov18(=ATCC TSD-231=NCTC 14611)。

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