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从北京猪胃中分离出的新种的表型和基因组特征 。

Phenotypic and Genomic Characteristics of sp. nov. Isolated from the Stomachs of Pigs in Beijing.

作者信息

Wang Hairui, Gu Yixin, He Lihua, Sun Lu, Zhou Guilan, Chen Xiaoli, Zhang Xin, Shao Zhujun, Zhang Jianzhong, Zhang Maojun

机构信息

State Key Laboratory for Infectious Disease Prevention and Control, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing 102206, China.

出版信息

Microorganisms. 2023 Sep 10;11(9):2278. doi: 10.3390/microorganisms11092278.

DOI:10.3390/microorganisms11092278
PMID:37764121
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10534318/
Abstract

is among the four main causes of gastroenteritis worldwide. Most reported infections are caused by and . However, other emerging pathogens have been recognized as important pathogens in humans and animals. A novel bacterial strain, PS10, was isolated from the gastric mucous of pigs in 2022 in Beijing, China. The cell was Gram-negative, microaerobic, motile, and negative for catalase, oxidase, and urease. Phylogenetic and phylogenomic analyses based on the 16S rRNA gene and core genome indicated that this isolate belongs to the genus . There were low dDDH relatedness and ANI values shared within this strain and its closest species below the cut-off values generally recognized for isolates of the same species. The draft genome size of PS10 is 2,240,910 bp in length with a percentage of DNA G+C contents of 37.72%. Comparing the phenotypic and phylogenetic features among this isolate and its related organisms, strain PS10 represents a novel species within the genus , for which the name sp. nov. (Type strain PS10 = GDMCC 1.3686 = JCM 35849) is proposed.

摘要

是全球范围内肠胃炎的四大主要病因之一。大多数报告的感染是由 和 引起的。然而,其他新兴病原体已被确认为人和动物中的重要病原体。2022年在中国北京,从猪的胃黏液中分离出一种新型细菌菌株PS10。该细胞为革兰氏阴性、微需氧、有运动性,过氧化氢酶、氧化酶和尿素酶检测呈阴性。基于16S rRNA基因和核心基因组的系统发育和系统基因组分析表明,该分离株属于 属。该菌株与其最接近的物种之间的dDDH相关性和ANI值较低,低于通常认可的同物种分离株的临界值。PS10的基因组草图长度为2,240,910 bp,DNA G+C含量百分比为37.72%。比较该分离株与其相关生物的表型和系统发育特征,菌株PS10代表 属内的一个新物种,为此提出名称 新种(模式菌株PS10 = GDMCC 1.3686 = JCM 35849)。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/07d2/10534318/4758b3b73ed0/microorganisms-11-02278-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/07d2/10534318/85ae2b6c06de/microorganisms-11-02278-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/07d2/10534318/2e0d2318fbe9/microorganisms-11-02278-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/07d2/10534318/df7decb52d8d/microorganisms-11-02278-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/07d2/10534318/52905a401448/microorganisms-11-02278-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/07d2/10534318/4758b3b73ed0/microorganisms-11-02278-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/07d2/10534318/85ae2b6c06de/microorganisms-11-02278-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/07d2/10534318/2e0d2318fbe9/microorganisms-11-02278-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/07d2/10534318/df7decb52d8d/microorganisms-11-02278-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/07d2/10534318/52905a401448/microorganisms-11-02278-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/07d2/10534318/4758b3b73ed0/microorganisms-11-02278-g005.jpg

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