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旧貌换新颜:多组学时代的羽纹硅藻 (Gaillon) Simonsen。

What Was Old Is New Again: The Pennate Diatom (Gaillon) Simonsen in the Multi-Omic Age.

机构信息

Institute of Marine Biology, Biotechnology and Aquaculture, Hellenic Centre for Marine Research (HCMR), Gournes Pediados, 71003 Heraklion, Greece.

Oran High School of Biological Sciences (ESSBO), Cellular and Molecular Biology Department, Oran 31000, Algeria.

出版信息

Mar Drugs. 2022 Mar 29;20(4):234. doi: 10.3390/md20040234.

Abstract

The marine pennate diatom has long been known for its characteristic blue pigment marennine, which is responsible for the greening of invertebrate gills, a natural phenomenon of great importance for the oyster industry. For two centuries, this taxon was considered unique; however, the recent description of a new blue species revealed unsuspected biodiversity. Marennine-like pigments are natural blue dyes that display various biological activities-e.g., antibacterial, antioxidant and antiproliferative-with a great potential for applications in the food, feed, cosmetic and health industries. Regarding fundamental prospects, researchers use model organisms as standards to study cellular and physiological processes in other organisms, and there is a growing and crucial need for more, new and unconventional model organisms to better correspond to the diversity of the tree of life. The present work, thus, advocates for establishing as a new model organism by presenting its pros and cons-i.e., the interesting aspects of this peculiar diatom (representative of benthic-epiphytic phytoplankton, with original behavior and chemodiversity, controlled sexual reproduction, fundamental and applied-oriented importance, reference genome, and transcriptome will soon be available); it will also present the difficulties encountered before this becomes a reality as it is for other diatom models (the genetics of the species in its infancy, the transformation feasibility to be explored, the routine methods needed to cryopreserve strains of interest).

摘要

海洋羽纹硅藻长期以来以其特征性的蓝色色素马里宁而闻名,这种色素负责使无脊椎动物的鳃变绿,这是牡蛎产业中一个非常重要的自然现象。两个世纪以来,这个分类群被认为是独特的;然而,最近对一种新的蓝色物种的描述揭示了出人意料的生物多样性。马里宁类色素是天然蓝色染料,具有多种生物活性,如抗菌、抗氧化和抗增殖作用,在食品、饲料、化妆品和健康产业中有很大的应用潜力。关于基础前景,研究人员使用模式生物作为标准来研究其他生物体的细胞和生理过程,而且越来越需要更多、新的和非常规的模式生物,以更好地对应生命之树的多样性。因此,本工作通过介绍其优缺点,即这种特殊硅藻(代表底栖-附生浮游植物,具有原始行为和化学生物多样性、有性繁殖、基础和应用重要性、参考基因组和转录组即将可用)的有趣方面,主张将其确立为一种新的模式生物;它还将介绍在这成为现实之前所遇到的困难,就像其他硅藻模型一样(该物种的遗传学还处于起步阶段,需要探索转化的可行性,需要常规方法来冷冻保存感兴趣的菌株)。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2caf/9033121/e7d5712a6a72/marinedrugs-20-00234-g001.jpg

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