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重新设计群体感应系统的调控组件以实现多样化的代谢控制。

Redesigning regulatory components of quorum-sensing system for diverse metabolic control.

机构信息

State Key Laboratory of Chemical Resource Engineering, Beijing University of Chemical Technology, Beijing, 100029, China.

School of Chemical, Materials, and Biomedical Engineering, College of Engineering, The University of Georgia, Athens, GA, 30602, USA.

出版信息

Nat Commun. 2022 Apr 21;13(1):2182. doi: 10.1038/s41467-022-29933-x.

Abstract

Quorum sensing (QS) is a ubiquitous cell-cell communication mechanism that can be employed to autonomously and dynamically control metabolic fluxes. However, since the functions of genetic components in the circuits are not fully understood, the developed QS circuits are still less sophisticated for regulating multiple sets of genes or operons in metabolic engineering applications. Here, we discover the regulatory roles of a CRP-binding site and the lux box to -10 region within luxR-luxI intergenic sequence in controlling the lux-type QS promoters. By varying the numbers of the CRP-binding site and redesigning the lux box to -10 site sequence, we create a library of QS variants that possess both high dynamic ranges and low leakiness. These circuits are successfully applied to achieve diverse metabolic control in salicylic acid and 4-hydroxycoumarin biosynthetic pathways in Escherichia coli. This work expands the toolbox for dynamic control of multiple metabolic fluxes under complex metabolic background and presents paradigms to engineer metabolic pathways for high-level synthesis of target products.

摘要

群体感应 (QS) 是一种普遍存在的细胞间通讯机制,可用于自主和动态地控制代谢通量。然而,由于电路中遗传成分的功能尚未完全了解,因此开发的 QS 电路在代谢工程应用中仍然不太复杂,无法调节多组基因或操纵子。在这里,我们发现 CRP 结合位点和 lux 盒在 luxR-luxI 基因间序列中的 -10 区域对 lux 型 QS 启动子的调节作用。通过改变 CRP 结合位点的数量和重新设计 lux 盒到 -10 位序列,我们创建了一个 QS 变体文库,该文库具有高动态范围和低泄漏性。这些电路成功地应用于实现大肠杆菌中水杨酸和 4-羟基香豆素生物合成途径的多种代谢控制。这项工作扩展了在复杂代谢背景下对多种代谢通量进行动态控制的工具包,并为工程代谢途径以实现目标产物的高水平合成提供了范例。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/78df/9023504/93b3576c0652/41467_2022_29933_Fig1_HTML.jpg

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