Saurav Kumar, Caso Alessia, Urajová Petra, Hrouzek Pavel, Esposito Germana, Delawská Kateřina, Macho Markéta, Hájek Jan, Cheel José, Saha Subhasish, Divoká Petra, Arsin Sila, Sivonen Kaarina, Fewer David P, Costantino Valeria
Laboratory of Algal Biotechnology-Centre Algatech, Institute of Microbiology of the Czech Academy of Sciences, 37901 Třeboň, Czech Republic.
TheBlue Chemistry Lab, Università Degli Studi di Napoli "Federico II", task Force "BigFed2", Napoli 80131, Italy.
ACS Omega. 2022 Mar 28;7(14):11818-11828. doi: 10.1021/acsomega.1c07160. eCollection 2022 Apr 12.
Puwainaphycins (PUW) and minutissamides (MIN) are structurally homologous cyclic lipopeptides that exhibit high structural variability and possess antifungal and cytotoxic activities. While only a minor variation can be found in the amino acid composition of the peptide cycle, the fatty acid (FA) moiety varies largely. The effect of FA functionalization on the bioactivity of PUW/MIN chemical variants is poorly understood. A rapid and selective liquid chromatography-mass spectrometry-based method led us to identify 13 PUW/MIN () chemical variants from the benthic cyanobacterium strain UHCC-0300 from the Baltic Sea. Five new variants identified were designated as PUW H (), PUW I (), PUW J (), PUW K (), and PUW L () and varied slightly in the peptidic core composition, but a larger variation was observed in the oxo-, chloro-, and hydroxy-substitutions on the FA moiety. To address the effect of FA substitution on the cytotoxic effect, the major variants ( and -) together with four other PUW/MIN variants (-) previously isolated were included in the study. The data obtained showed that hydroxylation of the FA moiety abolishes the cytotoxicity or significantly reduces it when compared with the oxo-substituted C-FA (compounds -). The oxo-substitution had only a minor effect on the cytotoxicity of the compound when compared to variants bearing no substitution. The activity of PUW/MIN variants with chlorinated FA moieties varied depending on the position of the chlorine atom on the FA chain. This study also shows that variation in the amino acids distant from the FA moiety (position 4-8 of the peptide cycle) does not play an important role in determining the cytotoxicity of the compound. These findings confirmed that the lipophilicity of FA is essential to maintain the cytotoxicity of PUW/MIN lipopeptides. Further, a 63 kb puwainaphycin biosynthetic gene cluster from a draft genome of the strain UHCC-0300 was identified. This pathway encoded two specific lipoinitiation mechanisms as well as enzymes needed for the modification of the FA moiety. Examination on biosynthetic gene clusters and the structural variability of the produced PUW/MIN suggested different mechanisms of fatty-acyl-AMP ligase cooperation with accessory enzymes leading to a new set of PUW/MIN variants bearing differently substituted FA.
普瓦纳霉素(PUW)和微小霉素(MIN)是结构同源的环脂肽,具有高度的结构变异性,并具有抗真菌和细胞毒性活性。虽然在肽环的氨基酸组成中只能发现微小的差异,但脂肪酸(FA)部分差异很大。FA功能化对PUW/MIN化学变体生物活性的影响了解甚少。一种基于快速选择性液相色谱-质谱的方法使我们从波罗的海的底栖蓝藻菌株UHCC-0300中鉴定出13种PUW/MIN()化学变体。鉴定出的五个新变体被命名为PUW H()、PUW I()、PUW J()、PUW K()和PUW L(),它们在肽核心组成上略有不同,但在FA部分的氧代、氯代和羟基取代上观察到更大的差异。为了研究FA取代对细胞毒性的影响,该研究纳入了主要变体(和-)以及先前分离的其他四种PUW/MIN变体(-)。获得的数据表明,与氧代取代的C-FA(化合物-)相比,FA部分的羟基化消除了细胞毒性或显著降低了细胞毒性。与无取代的变体相比,氧代取代对化合物的细胞毒性影响较小。具有氯化FA部分的PUW/MIN变体的活性取决于氯原子在FA链上的位置。这项研究还表明,远离FA部分的氨基酸(肽环的第4-8位)的变化在决定化合物的细胞毒性方面不起重要作用。这些发现证实,FA的亲脂性对于维持PUW/MIN脂肽的细胞毒性至关重要。此外,从菌株UHCC-0300的草图基因组中鉴定出一个63 kb的普瓦纳霉素生物合成基因簇。该途径编码两种特定的脂起始机制以及修饰FA部分所需的酶。对生物合成基因簇和产生的PUW/MIN的结构变异性的研究表明,脂肪酰-AMP连接酶与辅助酶合作的不同机制导致了一组新的带有不同取代FA的PUW/MIN变体。