Department of Health Security, Finnish Institute for Health and Welfare (THL), Helsinki, Finland.
Department of Virology, Faculty of Medicine, University of Helsinki, Helsinki, Finland.
Euro Surveill. 2022 Apr;27(16). doi: 10.2807/1560-7917.ES.2022.27.16.2200257.
Recombinant sequences of the SARS-CoV-2 Omicron variant were detected in surveillance samples collected in north-western Finland in January 2022. We detected 191 samples with an identical genome arrangement in weeks 3 to 11, indicating sustained community transmission. The recombinant lineage has a 5'-end of BA.1, a recombination breakpoint between and (nucleotide position 13,296-15,240) and a 3'-end of BA.2 including the gene. We describe the available genomic and epidemiological data about this currently circulating recombinant XJ lineage.
2022 年 1 月,在芬兰西北部的监测样本中检测到了 SARS-CoV-2 奥密克戎变体的重组序列。在第 3 周至第 11 周,我们检测到了 191 个具有相同基因组排列的样本,表明持续的社区传播。该重组谱系具有 BA.1 的 5'-端、和(核苷酸位置 13296-15240)之间的重组断点以及包括基因的 BA.2 的 3'-端。我们描述了关于这种当前循环的重组 XJ 谱系的可用基因组和流行病学数据。