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一种 RNA 结合蛋白的功能筛选方法可识别促进或限制 CD138+浆细胞积累的基因。

A functional screen of RNA binding proteins identifies genes that promote or limit the accumulation of CD138+ plasma cells.

机构信息

Immunology Programme, The Babraham Institute,Babraham Research Campus, Cambridge, United Kingdom.

RNA Biology Laboratory, Center for Cancer Research, National Cancer Institute (NCI), Frederick, United States.

出版信息

Elife. 2022 Apr 22;11:e72313. doi: 10.7554/eLife.72313.

Abstract

To identify roles of RNA binding proteins (RBPs) in the differentiation or survival of antibody secreting plasma cells we performed a CRISPR/Cas9 knockout screen of 1213 mouse RBPs for their ability to affect proliferation and/or survival, and the abundance of differentiated CD138 + cells in vitro. We validated the binding partners CSDE1 and STRAP as well as the mA binding protein YTHDF2 as promoting the accumulation of CD138 + cells in vitro. We validated the EIF3 subunits EIF3K and EIF3L and components of the CCR4-NOT complex as inhibitors of CD138 + cell accumulation in vitro. In chimeric mouse models YTHDF2-deficient plasma cells failed to accumulate.

摘要

为了确定 RNA 结合蛋白(RBPs)在分泌抗体的浆细胞分化或存活中的作用,我们对 1213 种小鼠 RBPs 进行了 CRISPR/Cas9 敲除筛选,以研究它们影响增殖和/或存活的能力,以及体外分化的 CD138+细胞的丰度。我们验证了结合伴侣 CSDE1 和 STRAP 以及 mA 结合蛋白 YTHDF2 可促进体外 CD138+细胞的积累。我们验证了 EIF3 亚基 EIF3K 和 EIF3L 以及 CCR4-NOT 复合物的成分是体外抑制 CD138+细胞积累的抑制剂。在嵌合小鼠模型中,YTHDF2 缺陷型浆细胞未能积累。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bf2e/9106329/344747602926/elife-72313-fig1.jpg

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