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综合分析确定成釉蛋白相关竞争性内源性RNA作为睾丸生殖细胞肿瘤的预后生物标志物。

Comprehensive Analysis Identifies Ameloblastin-Related Competitive Endogenous RNA as a Prognostic Biomarker for Testicular Germ Cell Tumour.

作者信息

Geng Tianxiang, Heyward Catherine Anne, Chen Xi, Zheng Mengxue, Yang Yang, Reseland Janne Elin

机构信息

Department of Biomaterials, Faculty of Dentistry, University of Oslo, 0455 Oslo, Norway.

Oral Research Laboratory, Faculty of Dentistry, University of Oslo, 0455 Oslo, Norway.

出版信息

Cancers (Basel). 2022 Apr 7;14(8):1870. doi: 10.3390/cancers14081870.

Abstract

Testicular Germ Cell Tumour (TGCT) is one of the most common tumours in young men. Increasing evidence shows that the extracellular matrix has a key role in the prognosis and metastasis of various human cancers. This study analysed the relationship between the matrix protein ameloblastin (AMBN) and potential biological markers associated with TGCT diagnosis and prognosis. The relationship between AMBN and TGCT prognosis was determined by bioinformatic analysis using the expression profiles of three RNAs (long non-coding RNAs (lncRNAs), microRNAs (miRNAs) and mRNAs) from The Cancer Genome Atlas (TCGA) database, and available clinical information of the corresponding patients. Prediction and validation of competitive endogenous RNA (ceRNA) regulatory networks related to AMBN was performed. AMBN and its associated ceRNA regulatory network were found to be related to the recurrence of TGCT, and LINC02701 may be used as a diagnostic factor in TGCT. Furthermore, we identified PELATON (Plaque Enriched LncRNA In Atherosclerotic And Inflammatory Bowel Macrophage Regulation) as an independent prognostic factor for TGCT progression-free interval.

摘要

睾丸生殖细胞肿瘤(TGCT)是年轻男性中最常见的肿瘤之一。越来越多的证据表明,细胞外基质在各种人类癌症的预后和转移中起关键作用。本研究分析了基质蛋白成釉蛋白(AMBN)与TGCT诊断和预后相关的潜在生物标志物之间的关系。通过生物信息学分析,利用来自癌症基因组图谱(TCGA)数据库的三种RNA(长链非编码RNA(lncRNA)、微小RNA(miRNA)和信使RNA(mRNA))的表达谱以及相应患者的可用临床信息,确定了AMBN与TGCT预后之间的关系。对与AMBN相关的竞争性内源RNA(ceRNA)调控网络进行了预测和验证。发现AMBN及其相关的ceRNA调控网络与TGCT的复发有关,LINC02701可能用作TGCT的诊断因子。此外,我们确定了PELATON(动脉粥样硬化和炎症性肠巨噬细胞调节中富含斑块的lncRNA)作为TGCT无进展生存期的独立预后因素。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f32c/9030878/2cd15397e4f1/cancers-14-01870-g001.jpg

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