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非致死性选择对移码突变自发回复突变体的影响:大肠杆菌 hisF 实例

Effect of Non-Lethal Selection on Spontaneous Revertants of Frameshift Mutations: The Escherichia coli hisF Case.

作者信息

Del Duca Sara, Puglia Anna Maria, Calderone Vito, Bazzicalupo Marco, Fani Renato

机构信息

Laboratory of Microbial and Molecular Evolution, Department of Biology, University of Florence, Via Madonna del Piano 6, 50019 Sesto Fiorentino, Italy.

Laboratory of Molecular Microbiology and Biotechnology, STEBICEF Department, University of Palermo, Viale delle Scienze Ed. 16, 90128 Palermo, Italy.

出版信息

Microorganisms. 2022 Mar 23;10(4):692. doi: 10.3390/microorganisms10040692.

Abstract

Microorganisms possess the potential to adapt to fluctuations in environmental parameters, and their evolution is driven by the continuous generation of mutations. The reversion of auxotrophic mutations has been widely studied; however, little is known about the reversion of frameshift mutations resulting in amino acid auxotrophy and on the structure and functioning of the protein encoded by the revertant mutated gene. The aims of this work were to analyze the appearance of reverse mutations over time and under different selective pressures and to investigate revertant enzymes' three-dimensional structures and their correlation with a different growth ability. FB182 strain, carrying the single nucleotide deletion resulting in histidine auxotrophy, was subjected to different selective pressures, and revertant mutants were isolated and characterized. The obtained results allowed us to identify different indels of different lengths located in different positions in the gene, and relations with the incubation time and the selective pressure applied were observed. Moreover, the structure of the different mutant proteins was consistent with the respective revertant ability to grow in absence of histidine, highlighting a correlation between the mutations and the catalytic activity of the mutated HisF enzyme.

摘要

微生物具有适应环境参数波动的潜力,其进化由持续产生的突变驱动。营养缺陷型突变的回复已得到广泛研究;然而,对于导致氨基酸营养缺陷的移码突变的回复以及回复突变基因编码的蛋白质的结构和功能却知之甚少。这项工作的目的是分析不同时间和不同选择压力下反向突变的出现情况,并研究回复酶的三维结构及其与不同生长能力的相关性。携带导致组氨酸营养缺陷的单核苷酸缺失的FB182菌株受到不同的选择压力,分离并鉴定了回复突变体。获得的结果使我们能够识别位于基因不同位置的不同长度的不同插入缺失,并观察到与孵育时间和施加的选择压力的关系。此外,不同突变蛋白的结构与各自在无组氨酸情况下生长的回复能力一致,突出了突变与突变的HisF酶催化活性之间的相关性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9ce0/9032791/a0b0ca540192/microorganisms-10-00692-g001.jpg

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