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无克隆基因组工程在……中的应用

Application of Cloning-Free Genome Engineering to .

作者信息

Romeo Lucia, Esposito Antonia, Bernacchi Alberto, Colazzo Daniele, Vassallo Alberto, Zaccaroni Marco, Fani Renato, Del Duca Sara

机构信息

Department of Biology, University of Florence, 50019 Sesto Fiorentino, Italy.

School of Biosciences and Veterinary Medicine, University of Camerino, 62032 Camerino, Italy.

出版信息

Microorganisms. 2023 Jan 15;11(1):215. doi: 10.3390/microorganisms11010215.

Abstract

The propagation of foreign DNA in is central to molecular biology. Recent advances have dramatically expanded the ability to engineer (bacterial) cells; however, most of these techniques remain time-consuming. The aim of the present work was to explore the possibility to use the cloning-free genome editing (CFGE) approach, proposed by Döhlemann and coworkers (2016), for genetics, and to deepen the knowledge about the homologous recombination mechanism. The auxotrophic mutant strains FB182 () and FB181 () were transformed with the circularized wild-type (i) gene and gene fragments of decreasing length, and (ii) gene, respectively. His clones were selected based on their ability to grow in the absence of histidine, and their / gene sequences were characterized. CFGE method allowed the recombination of wild-type genes (or fragments of them) within the mutated chromosomal copy, with a different recombination frequency based on the fragment length, and the generation of clones with a variable number of in tandem genes copies. Data obtained pave the way to further evolutionary studies concerning the homologous recombination mechanism and the fate of in tandem duplicated genes.

摘要

外源DNA在 中的传播是分子生物学的核心内容。最近的进展极大地扩展了对(细菌)细胞进行工程改造的能力;然而,这些技术大多仍然耗时。本研究的目的是探索使用Döhlemann及其同事(2016年)提出的无克隆基因组编辑(CFGE)方法进行 遗传学研究的可能性,并加深对同源重组机制的了解。分别用环化的野生型 (i) 基因和长度递减的 基因片段,以及(ii) 基因转化 营养缺陷型突变菌株FB182( )和FB181( )。根据它们在无组氨酸条件下生长的能力选择His克隆,并对它们的 / 基因序列进行表征。CFGE方法允许野生型 基因(或其片段)在突变的染色体拷贝内重组,根据片段长度具有不同的重组频率,并产生具有可变数量串联 基因拷贝的克隆。所获得的数据为进一步开展关于同源重组机制和串联重复基因命运的进化研究铺平了道路。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7311/9866961/e121fae3ce2b/microorganisms-11-00215-g001.jpg

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