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从模式生物到应用:细菌诱导绿藻石莼的生长和发育,以及微生物在藻类养殖中的利用潜力。

From model organism to application: Bacteria-induced growth and development of the green seaweed Ulva and the potential of microbe leveraging in algal aquaculture.

机构信息

Institute for Inorganic and Analytical Chemistry, Jena School for Microbial Communication, Friedrich Schiller University Jena, Lessingstraße 8, 07743 Jena, Germany.

出版信息

Semin Cell Dev Biol. 2023 Jan 30;134:69-78. doi: 10.1016/j.semcdb.2022.04.007. Epub 2022 Apr 19.

Abstract

The marine green macroalga Ulva (Chlorophyta, Ulvales), also known as sea lettuce, coexists with a diverse microbiome. Many Ulva species proliferate in nature and form green algal blooms ("green tides"), which can occur when nutrient-rich wastewater from agricultural or densely populated areas is flushed into the sea. Bacteria are necessary for the adhesion of Ulva to its substrate, its growth, and the development of its blade morphology. In the absence of certain bacteria, Ulva mutabilis develops into a callus-like morphotype. However, with the addition of the necessary marine bacteria, the entire morphogenesis can be restored. Surprisingly, just two bacteria isolated from U. mutabilis are sufficient for inducing morphogenesis and establishing the reductionist system of a tripartite community. While one bacterial strain causes algal blade cell division, another causes the differentiation of basal cells into a rhizoid and supports cell wall formation because of a low concentration of the morphogen thallusin (below 10 mol/L). This review focuses on the research conducted on this topic since 2015, discusses how U. mutabilis has developed into a model organism in chemical ecology, and explores the questions that have already been addressed and the perspectives that a reductionist model system allows. In particular, the field of systems biology will achieve a comprehensive, quantitative understanding of the dynamic interactions between Ulva and its associated bacteria to better predict the behavior of the system as a whole. The reductionist approach has enabled the study of the bacteria-induced morphogenesis of Ulva. Specific questions regarding the optimization of cultivation conditions as well as the yield of raw materials for the food and animal feed industries can be answered in the laboratory and through applied science. Genome sequencing, the improvement of genetic engineering tools, and the first promising attempts to leverage macroalgae-microbe interactions in aquaculture make this model organism, which has a comparatively short parthenogenetic life cycle, attractive for both fundamental and applied research. The reviewed research paves the way for the synthetic biology of macroalgae-associated microbiomes in sustainable aquacultures.

摘要

海洋绿藻石莼(绿藻门,石莼目),俗称海白菜,与多样化的微生物共生。许多石莼物种在自然界中大量繁殖,形成绿藻水华(“绿潮”),当富含营养的农业或人口密集区废水冲入大海时,就会发生这种情况。细菌是石莼附着在其基质上、生长和叶片形态发育所必需的。在缺乏某些细菌的情况下,变叶石莼会发育成愈伤组织样形态。然而,添加必要的海洋细菌可以完全恢复整个形态发生过程。令人惊讶的是,仅从变叶石莼中分离出的两种细菌就足以诱导形态发生并建立三方共生的简化系统。一种细菌菌株引起藻类叶片细胞分裂,另一种引起基细胞分化为根状茎,并由于形态发生素石莼素(低于 10 摩尔/升)的低浓度而支持细胞壁形成。本综述重点关注自 2015 年以来在该主题上开展的研究,讨论了变叶石莼如何发展成为化学生态学的模式生物,并探讨了已经解决的问题和简化模型系统所允许的观点。特别是,系统生物学领域将实现对石莼及其相关细菌之间动态相互作用的全面、定量理解,以更好地预测整个系统的行为。简化方法使研究细菌诱导的石莼形态发生成为可能。有关优化培养条件以及食品和动物饲料工业原材料产量的具体问题可以在实验室和应用科学中得到解答。基因组测序、遗传工程工具的改进以及利用海藻-微生物相互作用的首次有希望的尝试使这种具有相对较短的单性生殖生命周期的模式生物成为基础研究和应用研究的热门对象。综述的研究为可持续水产养殖中藻类相关微生物组的合成生物学铺平了道路。

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