Paulino Sauvann, Noël Cyril, Rieusset Laura, Taupin Laure, Le Blay Gwenaelle, Bourgougnon Nathalie
UBS, Laboratoire de Biotechnologie et Chimie Marines, EMR CNRS 6076, Vannes/Lorient, France.
Univ Brest, CNRS, IRD, Ifremer, LEMAR, F-29290 Plouzané, France.
Curr Res Microb Sci. 2025 Jul 11;9:100439. doi: 10.1016/j.crmicr.2025.100439. eCollection 2025.
Marine ecosystems are increasingly affected by climate change and eutrophication, placing considerable stress on macroalgae and potentially disrupting their mutualistic interactions with surface-associated microorganisms, especially bacteria. This study explored the temporal dynamics of epiphytic microbial communities (16S rRNA) and the surface metabolome (LC-MS) of spp. from southern Brittany (France) over a 17-month period. The data obtained were analyzed through multivariate techniques to uncover correlations between bacterial community structure and surface metabolites. Biochemical and environmental parameters were also examined to identify the factors driving temporal variations in the macroalgal surface landscape. The analysis revealed distinct bacterial communities on spp. surface, compared to those in surrounding seawater or on rocky substrate. Key environmental factors, including salinity, nitrate concentration, and precipitation, as well as the physiological traits of spp. (such as uronic acid content, lipid levels, and moisture), were identified as primary drivers of microbiota dynamics. A stable core microbial community, primarily composed of , and , was also observed within the spp. microbiota. Finally, correlations between Amplicon Sequence Variants (ASVs) and surface metabolites underscored the importance of an integrated multi-omics approach to enhance our understanding of the complex dynamics between eukaryotic hosts and their associated microbiota.
海洋生态系统正日益受到气候变化和富营养化的影响,给大型藻类带来了巨大压力,并可能破坏它们与表面相关微生物(尤其是细菌)的共生相互作用。本研究在17个月的时间里,探索了来自法国布列塔尼南部的石莼属物种附生微生物群落(16S rRNA)和表面代谢组(液相色谱-质谱联用)的时间动态变化。通过多变量技术对获得的数据进行分析,以揭示细菌群落结构与表面代谢物之间的相关性。还检测了生化和环境参数,以确定驱动大型藻类表面景观随时间变化的因素。分析显示,与周围海水或岩石基质中的细菌群落相比,石莼属物种表面存在不同的细菌群落。关键环境因素,包括盐度、硝酸盐浓度和降水量,以及石莼属物种的生理特征(如糖醛酸含量、脂质水平和水分含量),被确定为微生物群动态变化的主要驱动因素。在石莼属物种的微生物群中还观察到一个稳定的核心微生物群落,主要由交替单胞菌属、芽孢杆菌属和假交替单胞菌属组成。最后,扩增子序列变体(ASV)与表面代谢物之间的相关性强调了综合多组学方法对于增强我们对真核宿主与其相关微生物群之间复杂动态关系理解的重要性。