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绿藻门大型绿藻石莼生长阶段相关生物标志物鉴定的时间进程外代谢组学分析

Time Course Exo-Metabolomic Profiling in the Green Marine Macroalga Ulva (Chlorophyta) for Identification of Growth Phase-Dependent Biomarkers.

作者信息

Alsufyani Taghreed, Weiss Anne, Wichard Thomas

机构信息

Institute for Inorganic and Analytical Chemistry, Jena School for Microbial Communication, Friedrich Schiller University Jena, Jena 07743, Germany.

出版信息

Mar Drugs. 2017 Jan 10;15(1):14. doi: 10.3390/md15010014.

Abstract

The marine green macroalga (Chlorophyta) lives in a mutualistic symbiosis with bacteria that influence growth, development, and morphogenesis. We surveyed changes in 's chemosphere, which was defined as a space where organisms interact with each other via compounds, such as infochemicals, nutrients, morphogens, and defense compounds. Thereby, cooperates with bacteria, in particular, sp. strain MS2 and sp. strain MS6 (formerly identified as sp. strain MS2 and sp. strain MS6). Without this accompanying microbial flora, forms only callus-like colonies. However, upon addition of the two bacteria species, in effect forming a tripartite community, morphogenesis can be completely restored. Under this strictly standardized condition, bioactive and eco-physiologically-relevant marine natural products can be discovered. Solid phase extracted waterborne metabolites were analyzed using a metabolomics platform, facilitating gas chromatography-mass spectrometry (GC-MS) and liquid chromatography-mass spectrometry (LC-MS) analysis, combined with the necessary acquisition of biological metadata. Multivariate statistics of the GC-MS and LC-MS data revealed strong differences between 's growth phases, as well as between the axenic cultures and the tripartite community. Waterborne biomarkers, including glycerol, were identified as potential indicators for algal carbon source and bacterial-algal interactions. Furthermore, it was demonstrated that releases glycerol that can be utilized for growth by sp. MS2.

摘要

海洋绿色大型藻类(绿藻门)与影响其生长、发育和形态发生的细菌形成互利共生关系。我们调查了该藻类化学圈的变化,化学圈被定义为生物体通过信息化学物质、营养物质、形态发生素和防御化合物等化合物相互作用的空间。因此,该藻类与细菌合作,特别是与MS2菌株和MS6菌株(以前分别鉴定为MS2菌株和MS6菌株)。没有这种伴随的微生物群落,该藻类仅形成愈伤组织样菌落。然而,添加这两种细菌后,实际上形成了三方群落,形态发生得以完全恢复。在这种严格标准化的条件下,可以发现具有生物活性和生态生理相关性的海洋天然产物。使用代谢组学平台对固相萃取的水性代谢物进行分析,便于进行气相色谱 - 质谱(GC - MS)和液相色谱 - 质谱(LC - MS)分析,并结合必要的生物元数据采集。GC - MS和LC - MS数据的多变量统计显示出该藻类生长阶段之间以及无菌藻类培养物和三方群落之间存在显著差异。包括甘油在内的水性生物标志物被确定为藻类碳源和细菌 - 藻类相互作用的潜在指标。此外,还证明该藻类释放的甘油可被MS2菌株用于生长。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4be7/5295234/ee9d5a3e2292/marinedrugs-15-00014-g001.jpg

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