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野生马铃薯近缘种之一的[物种名称]的完整叶绿体基因组序列。 (原文中“of”后面缺少具体物种名称)

Complete chloroplast genome sequence of , one of the wild potato relatives.

作者信息

Park Tae-Ho

机构信息

Department of Horticulture, Daegu University, Gyeongsan, South Korea.

出版信息

Mitochondrial DNA B Resour. 2022 Apr 25;7(4):715-717. doi: 10.1080/23802359.2022.2068983. eCollection 2022.

Abstract

is a wild tuber-bearing species classified in the Solanaceae family. The chloroplast genome of was completed via assembly using Illumina paired-end sequencing data. Total length of the chloroplast genome of is 155,545 bp consisting of 85,976 bp in a large single copy, 18,383 bp in a small single copy, and 25,593 bp in a pair of inverted repeat regions. Its structure is circular and typically quadripartite. It contains 158 predicted genes in total, including 105 protein-coding, 45 tRNA, and eight rRNA genes. Maximum likelihood phylogenetic analysis of the sequence along with 33 species in the family revealed that belongs to a large clade with other species including and is most closely grouped in the clade with and in the clade.

摘要

是一种野生的块茎类物种,归类于茄科。通过使用Illumina双端测序数据进行组装,完成了其叶绿体基因组的测序。其叶绿体基因组全长155,545 bp,包括一个85,976 bp的大单拷贝区、一个18,383 bp的小单拷贝区和一对25,593 bp的反向重复区域。其结构为环状,典型的四分体结构。总共包含158个预测基因,其中包括105个蛋白质编码基因、45个tRNA基因和8个rRNA基因。对该序列与茄科33个物种进行的最大似然系统发育分析表明,它与包括[具体物种1]和[具体物种2]在内的其他[具体物种3]物种属于一个大分支,并且在该分支中与[具体物种4]和[具体物种5]的亲缘关系最为密切。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f51a/9045759/68cf209a07f6/TMDN_A_2068983_F0001_B.jpg

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