Liu Yongle, Tang Xuan, Deng Aihua, Li Huan, Xiao Yulong, Zhao Wenyan, Xiang Lixuan, Liu Yi, Yao Zui, Zeng Xingyu, Du Zhitian, Huang Rongjie, Yin Hanbin, Huang Kerui
Hunan Provincial Key Laboratory for Molecular Immunity Technology of Aquatic Animal Diseases, College of Life and Environmental Sciences, Hunan University of Arts and Science, Changde, Hunan, China.
Mitochondrial DNA B Resour. 2024 Sep 30;9(10):1285-1290. doi: 10.1080/23802359.2024.2410442. eCollection 2024.
Linnaeus 1753, a popular indoor potted plant known for its ornamental fruits, had its chloroplast genome sequenced in this study to determine its phylogenetic relationship with other related species and to construct a phylogenetic analysis tree. The research findings are as follows: 1. The chloroplast genome of comprises a large single-copy (LSC) region of 86,260 base pairs, a small single-copy (SSC) region of 18,325 base pairs, and two inverted repeat (IR) regions, each measuring 25,390 base pairs in length. 2. The G + C content of the entire chloroplast genome is 37.59%, with the highest G + C content found in the IR regions, reaching 43.03%; followed by the LSC region, which has a G + C content of 35.68%; and the lowest in the SSC region, with a G + C content of 31.53%. 3. The genome contains 127 genes, including 82 protein-coding genes, 37 tRNA genes, and 8 rRNA genes, with 18 genes duplicated in the IR regions. 4. Phylogenetic analysis revealed that , , , and are genetically closely related and are located on the same branch of the phylogenetic tree, indicating a close relationship among them. This study provides a foundation for the identification, classification, and exploration of genetic diversity within the genus.
番茄(1753年林奈命名)是一种常见的室内盆栽植物,以其观赏性果实而闻名。在本研究中,对其叶绿体基因组进行了测序,以确定它与其他相关物种的系统发育关系,并构建系统发育分析树。研究结果如下:1. 番茄的叶绿体基因组由一个86,260个碱基对的大单拷贝(LSC)区域、一个18,325个碱基对的小单拷贝(SSC)区域和两个长度均为25,390个碱基对的反向重复(IR)区域组成。2. 整个叶绿体基因组的G + C含量为37.59%,其中IR区域的G + C含量最高,达到43.03%;其次是LSC区域,G + C含量为35.68%;SSC区域的G + C含量最低,为31.53%。3. 该基因组包含127个基因,包括82个蛋白质编码基因、37个tRNA基因和8个rRNA基因,其中有18个基因在IR区域重复。4. 系统发育分析表明,番茄、茄子、辣椒和枸杞在遗传上密切相关,位于系统发育树的同一分支上,表明它们之间关系密切。本研究为番茄属植物的鉴定、分类和遗传多样性探索提供了基础。