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在亲和力成熟过程中,抗-(4-羟基-3-硝基苯基)乙酰抗体的热稳定性和结合亲和力之间的权衡。

A Trade-off Between Thermostability and Binding Affinity of Anti-(4-hydroxy-3-nitrophenyl)Acetyl Antibodies During the Course of Affinity Maturation.

机构信息

Graduate School of Life and Environmental Sciences, Kyoto Prefectural University, 1-5 Shimogamo Hangi-cho, Sakyo-ku, Kyoto, 606-8522, Japan.

Graduate School of Biomedical Sciences, Tokushima University, 3-18-15 Kuramoto, Tokushima, 770-8504, Japan.

出版信息

Protein J. 2022 Apr;41(2):293-303. doi: 10.1007/s10930-022-10053-w. Epub 2022 Apr 30.

DOI:10.1007/s10930-022-10053-w
PMID:35501455
Abstract

Somatic hypermutation (SHM) is one of the driving forces that increases antibody (Ab) affinity. We studied the effects of SHM on thermostability and affinity using three single-chain Fv fragments (scFvs) of anti-(4-hydroxy-3-nitrophenyl)acetyl Abs, namely 9TG, 9T7, and E11. 9TG has a germline structure that lacks SHM and is an ancestor of 9T7 with 11 mutations. E11, which has 21 mutations, is a mature Ab and has its own ancestor. The thermostabilities and antigen-Ab interactions were analyzed by circular dichroism (CD), differential scanning calorimetry (DSC), and isothermal titration calorimetry (ITC). Far-UV CD spectra showed that all scFvs were folded into a structure referred to as immunoglobulin-fold and were unfolded by heating at different melting temperatures. Comparison of thermodynamic parameters obtained from DSC and ITC revealed that the magnitude of stabilization free energy at 37 °C was in the order, 9TG > 9T7 > E11, while that of the free energy of interaction with antigen was 9TG < 9T7 < E11, suggesting that Abs make a trade-off between stability and affinity during affinity maturation.

摘要

体细胞超突变(SHM)是增加抗体(Ab)亲和力的驱动力之一。我们使用三种抗-(4-羟基-3-硝基苯乙酰基)Ab 的单链 Fv 片段(scFv)研究了 SHM 对热稳定性和亲和力的影响,即 9TG、9T7 和 E11。9TG 具有缺乏 SHM 的种系结构,是具有 11 个突变的 9T7 的祖先。E11 具有 21 个突变,是成熟的 Ab,有自己的祖先。通过圆二色性(CD)、差示扫描量热法(DSC)和等温滴定量热法(ITC)分析热稳定性和抗原-Ab 相互作用。远紫外 CD 光谱表明,所有 scFv 均折叠成一种称为免疫球蛋白折叠的结构,并在不同的熔点下通过加热而展开。从 DSC 和 ITC 获得的热力学参数的比较表明,在 37°C 时稳定自由能的大小顺序为 9TG>9T7>E11,而与抗原相互作用的自由能顺序为 9TG<9T7<E11,这表明 Abs 在亲和力成熟过程中在稳定性和亲和力之间进行了权衡。

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Anal Chem. 2020 Mar 3;92(5):3512-3516. doi: 10.1021/acs.analchem.9b05712. Epub 2020 Feb 12.
2
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Mol Immunol. 2019 Oct;114:545-552. doi: 10.1016/j.molimm.2019.09.001. Epub 2019 Sep 11.
3
High-affinity IgM memory B cells are defective in differentiation into IgM antibody-secreting cells by re-stimulation with a T cell-dependent antigen.
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Sci Rep. 2018 Sep 28;8(1):14559. doi: 10.1038/s41598-018-32926-w.
4
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Elife. 2018 Apr 17;7:e28477. doi: 10.7554/eLife.28477.
5
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Mol Immunol. 2017 May;85:130-136. doi: 10.1016/j.molimm.2017.02.010. Epub 2017 Feb 27.
6
Structural dynamics of a single-chain Fv antibody against (4-hydroxy-3-nitrophenyl)acetyl.针对(4-羟基-3-硝基苯乙酰基)的单链 Fv 抗体的结构动力学。
Int J Biol Macromol. 2016 Oct;91:151-7. doi: 10.1016/j.ijbiomac.2016.05.074. Epub 2016 May 21.
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10
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