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基于人工神经网络的研究预测 GS-441524 可能是 SARS-CoV-2 激活蛋白弗林的抑制剂:一种多药理学方法。

Artificial Neural Network-Based Study Predicts GS-441524 as a Potential Inhibitor of SARS-CoV-2 Activator Protein Furin: a Polypharmacology Approach.

机构信息

Research and Development Centre, Bharathiar University, Marudhamalai Rd, Coimbatore, Tamil Nadu, India.

Department of Biotechnology, College of Basic Science and Humanities, Odisha University of Agriculture and Technology, Bhubaneswar, Odisha, India.

出版信息

Appl Biochem Biotechnol. 2022 Oct;194(10):4511-4529. doi: 10.1007/s12010-022-03928-2.

Abstract

Furin, a pro-protein convertase, plays a significant role as a biological scissor in bacterial, viral, and even mammalian substrates which in turn decides the fate of many viral and bacterial infections along with the numerous ailments caused by cancer, diabetes, inflammations, and neurological disorders. In the wake of the current pandemic caused by the virus SARS-CoV-2, furin has become the center of attraction for researchers as the spike protein contains a polybasic furin cleavage site. In the present work, we have searched for novel inhibitors against this interesting human target from FDA-approved antiviral. To enhance the selection of new inhibitors, we employed Kohonen's artificial neural network-based self-organizing maps for ligand-based virtual screening. Promising results were obtained which can help in drug repurposing and network pharmacology studies can address the errors generated due to promiscuity/polypharmacology. We found 15 existing FDA antiviral drugs having the potential to inhibit furin. Among these, six compounds have targets on important human proteins (LDLR, FCGR1A, PCK1, TLR7, DNA, and PNP). The role of these 15 drugs inhibiting furin can be established by studying further on patients infected with number of viruses including SARS-CoV-2. Here we propose two promising candidate FDA drugs GS-441524 and Grazoprevir (MK-5172) for repurposing as inhibitors of furin. The best results were observed with GS-441524.

摘要

弗林蛋白酶(furin)是一种蛋白原转化酶,作为一种生物剪刀,在细菌、病毒甚至哺乳动物底物中发挥着重要作用,进而决定了许多病毒和细菌感染的命运,以及癌症、糖尿病、炎症和神经紊乱等多种疾病的发生。在由 SARS-CoV-2 病毒引起的当前大流行中,弗林蛋白酶成为了研究人员关注的焦点,因为其刺突蛋白含有一个多碱性弗林蛋白酶切割位点。在目前的工作中,我们从已批准的抗病毒药物中搜索针对这一有趣人类靶点的新型抑制剂。为了增强对新型抑制剂的选择,我们采用了基于科恩神经网络的自组织映射算法进行基于配体的虚拟筛选。得到了有希望的结果,这有助于药物再利用和网络药理学研究,以解决由于混杂性/多效性导致的错误。我们发现了 15 种具有抑制弗林蛋白酶潜力的现有 FDA 抗病毒药物。其中,六种化合物的靶标是重要的人类蛋白(LDLR、FCGR1A、PCK1、TLR7、DNA 和 PNP)。通过研究感染多种病毒(包括 SARS-CoV-2)的患者,可以确定这 15 种药物抑制弗林蛋白酶的作用。在此,我们提出两种有希望的 FDA 候选药物 GS-441524 和 Grazoprevir(MK-5172),作为弗林蛋白酶抑制剂进行再利用。观察到 GS-441524 的最佳结果。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fa83/9066385/d671642a28dc/12010_2022_3928_Fig1_HTML.jpg

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