Department of Chemistry, Princeton University, Princeton, NJ 08544, USA.
Department of Molecular Biology, Princeton University, Princeton, NJ 08544, USA.
Angew Chem Int Ed Engl. 2022 Jul 18;61(29):e202204519. doi: 10.1002/anie.202204519. Epub 2022 May 25.
Fungi offer a deep source of natural products but remain underutilized. Most biosynthetic gene clusters (BGCs) that can be detected are silent or "cryptic" in standard lab cultures and their products are thus not interrogated in routine screens. As genetic alterations are difficult and some strains can only be grown on agar, we have herein applied an agar-based high-throughput chemical genetic screen to identify inducers of fungal BGCs. Using R. solani and S. sclerotiorum as test cases, we report 13 cryptic metabolites in four compound groups, including sclerocyclane, a natural product with a novel scaffold. Steroids were the best elicitors and follow-up studies showed that plant-steroids trigger sclerocyclane synthesis, which shows antibiotic activity against B. plantarii, an ecological competitor of S. sclerotiorum. Our results open new paths to exploring the chemical ecology of fungal-plant interactions and provide a genetics-free approach for uncovering cryptic fungal metabolites.
真菌提供了丰富的天然产物资源,但仍未得到充分利用。在标准实验室培养中,大多数可检测到的生物合成基因簇(BGCs)都是沉默的或“隐藏的”,其产物因此不会在常规筛选中被检测到。由于遗传改变很困难,而且有些菌株只能在琼脂上生长,我们在此应用了基于琼脂的高通量化学遗传筛选方法来鉴定真菌 BGCs 的诱导剂。我们使用 R. solani 和 S. sclerotiorum 作为测试案例,在四个化合物组中报告了 13 种隐藏代谢物,包括具有新型支架的天然产物 sclerocyclane。类固醇是最好的诱导剂,后续研究表明,植物类固醇触发 sclerocyclane 的合成,对 S. sclerotiorum 的生态竞争者 B. plantarii 具有抗生素活性。我们的结果为探索真菌-植物相互作用的化学生态学开辟了新途径,并为揭示隐藏的真菌代谢物提供了一种无遗传学方法。