• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

解析色氨酸非平衡与平衡溶剂化动力学之间的联系:荧光斯托克斯位移线性响应理论的成功与失败

To unravel the connection between the non-equilibrium and equilibrium solvation dynamics of tryptophan: success and failure of the linear response theory of fluorescence Stokes shift.

作者信息

Wang Xiaofang, Guo Jirui, Li Tanping, Wei Zhiyi

机构信息

School of Physics and Optoelectronic Engineering, Xidian University Xi'an 710071 People's Republic of China

Beijing National Laboratory for Condensed Matter Physics, Institute of Physics, Chinese Academy of Sciences Beijing 100190 China.

出版信息

RSC Adv. 2020 May 13;10(31):18348-18354. doi: 10.1039/d0ra01227k. eCollection 2020 May 10.

DOI:10.1039/d0ra01227k
PMID:35517244
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9053704/
Abstract

The connections between the non-equilibrium solvation dynamics upon optical transitions and the system's equilibrium fluctuations are explored in aqueous liquid. Linear response theory correlates time-dependent fluorescence with the equilibrium time correlation functions. In the previous work [T. Li, , 2017, , 1867], Stokes shift was explicitly decomposed into the contributions of various order time correlation functions on the excited state surface. Gaussian fluctuations of the solute-solvent interactions validate linear response theory. Correspondingly, the deviation of the Gaussian statistics causes the inefficiency of linear response evaluation. The above mechanism is thoroughly tested in this study. By employing molecular simulations, multiple non-equilibrium processes, not necessarily initiated from the ground state equilibrium minimum, were examined for tryptophan. Both the success and failure of linear response theory are found for this simple system and the mechanism is analyzed. These observations, assisted by the width dynamics, the initial state linear response approach, and the variation of the solvation structures, integrally verify the virtue of the excited state Gaussian statistics on the dynamics of Stokes shift.

摘要

在水性液体中探索了光学跃迁时的非平衡溶剂化动力学与系统平衡涨落之间的联系。线性响应理论将随时间变化的荧光与平衡时间关联函数联系起来。在之前的工作中 [T. Li, , 2017, , 1867],斯托克斯位移被明确分解为激发态表面上各种阶次时间关联函数的贡献。溶质 - 溶剂相互作用的高斯涨落验证了线性响应理论。相应地,高斯统计的偏差导致线性响应评估效率低下。本研究对上述机制进行了全面测试。通过分子模拟,研究了色氨酸的多个非平衡过程,这些过程不一定从基态平衡最小值开始。对于这个简单系统,发现了线性响应理论的成功与失败之处,并对其机制进行了分析。这些观察结果,借助宽度动力学、初始态线性响应方法以及溶剂化结构的变化,整体验证了激发态高斯统计在斯托克斯位移动力学方面的优点。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/97cf/9053704/58d7125b9405/d0ra01227k-f8.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/97cf/9053704/cfd542f53edf/d0ra01227k-f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/97cf/9053704/363127bc4e84/d0ra01227k-f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/97cf/9053704/9ee4fc562b5c/d0ra01227k-f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/97cf/9053704/97d7e1e95e9c/d0ra01227k-f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/97cf/9053704/6399e900f086/d0ra01227k-f5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/97cf/9053704/928c4406fef1/d0ra01227k-f6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/97cf/9053704/e873abbcf34f/d0ra01227k-f7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/97cf/9053704/58d7125b9405/d0ra01227k-f8.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/97cf/9053704/cfd542f53edf/d0ra01227k-f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/97cf/9053704/363127bc4e84/d0ra01227k-f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/97cf/9053704/9ee4fc562b5c/d0ra01227k-f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/97cf/9053704/97d7e1e95e9c/d0ra01227k-f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/97cf/9053704/6399e900f086/d0ra01227k-f5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/97cf/9053704/928c4406fef1/d0ra01227k-f6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/97cf/9053704/e873abbcf34f/d0ra01227k-f7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/97cf/9053704/58d7125b9405/d0ra01227k-f8.jpg

相似文献

1
To unravel the connection between the non-equilibrium and equilibrium solvation dynamics of tryptophan: success and failure of the linear response theory of fluorescence Stokes shift.解析色氨酸非平衡与平衡溶剂化动力学之间的联系:荧光斯托克斯位移线性响应理论的成功与失败
RSC Adv. 2020 May 13;10(31):18348-18354. doi: 10.1039/d0ra01227k. eCollection 2020 May 10.
2
Role of excited state solvent fluctuations on time-dependent fluorescence Stokes shift.激发态溶剂涨落在时间分辨荧光斯托克斯位移中的作用。
J Chem Phys. 2015 Nov 7;143(17):174501. doi: 10.1063/1.4934661.
3
Linear Response Theory for Decomposition Energies of Stokes Shift in Proteins.蛋白质中斯托克斯位移分解能量的线性响应理论
J Phys Chem B. 2020 Apr 30;124(17):3540-3547. doi: 10.1021/acs.jpcb.9b11519. Epub 2020 Apr 9.
4
Efficient Criterion To Evaluate Linear Response Theory in Optical Transitions.高效评估光学跃迁中线性响应理论的判据。
J Chem Theory Comput. 2017 May 9;13(5):1867-1873. doi: 10.1021/acs.jctc.6b01083. Epub 2017 Apr 21.
5
On the validity of linear response approximations regarding the solvation dynamics of polyatomic solutes.关于多原子溶质溶剂化动力学的线性响应近似的有效性
Phys Chem Chem Phys. 2017 May 3;19(17):10940-10950. doi: 10.1039/c6cp08575j.
6
Theoretical Insights on Nonlinear Response Theory of Fluorescence Spectroscopy in Liquids.液体荧光光谱非线性响应理论的理论见解。
J Chem Theory Comput. 2019 Jan 8;15(1):471-476. doi: 10.1021/acs.jctc.8b00538. Epub 2018 Dec 31.
7
Explicit Projection of Stokes Shifts onto Solvent Motion in an Aqueous Liquid and Linear Response Theory.斯托克斯位移在水性液体中向溶剂运动的显式投影及线性响应理论
J Phys Chem B. 2022 Nov 17;126(45):9168-9175. doi: 10.1021/acs.jpcb.2c05012. Epub 2022 Nov 7.
8
Decompositions of Solvent Response Functions in Ionic Liquids: A Direct Comparison of Equilibrium and Nonequilibrium Methodologies.离子液体中溶剂响应函数的分解:平衡法与非平衡法的直接比较
J Phys Chem B. 2018 Jul 5;122(26):6823-6828. doi: 10.1021/acs.jpcb.8b04235. Epub 2018 Jun 22.
9
Solvation dynamics in polar solvents and imidazolium ionic liquids: failure of linear response approximations.极性溶剂和咪唑鎓离子液体中的溶剂化动力学:线性响应近似的失效
Phys Chem Chem Phys. 2018 Feb 14;20(7):5246-5255. doi: 10.1039/c7cp07052g.
10
Vibrational frequency fluctuation of ions in aqueous solutions studied by three-pulse infrared photon echo method.水溶液中离子的振动频率涨落的三脉冲红外光子回波法研究。
Acc Chem Res. 2012 Nov 20;45(11):1982-91. doi: 10.1021/ar300017h. Epub 2012 Oct 30.

本文引用的文献

1
Polarizability in ionic liquid simulations causes hidden breakdown of linear response theory.离子液体模拟中的极化率导致线性响应理论的隐性崩溃。
Phys Chem Chem Phys. 2019 Jan 21;21(3):1023-1028. doi: 10.1039/c8cp06569a. Epub 2019 Jan 2.
2
Theoretical Insights on Nonlinear Response Theory of Fluorescence Spectroscopy in Liquids.液体荧光光谱非线性响应理论的理论见解。
J Chem Theory Comput. 2019 Jan 8;15(1):471-476. doi: 10.1021/acs.jctc.8b00538. Epub 2018 Dec 31.
3
Decompositions of Solvent Response Functions in Ionic Liquids: A Direct Comparison of Equilibrium and Nonequilibrium Methodologies.
离子液体中溶剂响应函数的分解:平衡法与非平衡法的直接比较
J Phys Chem B. 2018 Jul 5;122(26):6823-6828. doi: 10.1021/acs.jpcb.8b04235. Epub 2018 Jun 22.
4
Solvation dynamics in polar solvents and imidazolium ionic liquids: failure of linear response approximations.极性溶剂和咪唑鎓离子液体中的溶剂化动力学:线性响应近似的失效
Phys Chem Chem Phys. 2018 Feb 14;20(7):5246-5255. doi: 10.1039/c7cp07052g.
5
Tests for, origins of, and corrections to non-Gaussian statistics. The dipole-flip model.测试、起源和修正非高斯统计。偶极翻转模型。
J Chem Phys. 2017 Apr 21;146(15):154109. doi: 10.1063/1.4981009.
6
Efficient Criterion To Evaluate Linear Response Theory in Optical Transitions.高效评估光学跃迁中线性响应理论的判据。
J Chem Theory Comput. 2017 May 9;13(5):1867-1873. doi: 10.1021/acs.jctc.6b01083. Epub 2017 Apr 21.
7
On the validity of linear response approximations regarding the solvation dynamics of polyatomic solutes.关于多原子溶质溶剂化动力学的线性响应近似的有效性
Phys Chem Chem Phys. 2017 May 3;19(17):10940-10950. doi: 10.1039/c6cp08575j.
8
Mapping Hydration Dynamics around a β-Barrel Protein.绘制β-桶状蛋白周围的水合动力学图谱。
J Am Chem Soc. 2017 Mar 29;139(12):4399-4408. doi: 10.1021/jacs.6b12463. Epub 2017 Mar 15.
9
Dynamics and mechanism of ultrafast water-protein interactions.超快水-蛋白质相互作用的动力学与机制
Proc Natl Acad Sci U S A. 2016 Jul 26;113(30):8424-9. doi: 10.1073/pnas.1602916113. Epub 2016 Jun 23.
10
Role of excited state solvent fluctuations on time-dependent fluorescence Stokes shift.激发态溶剂涨落在时间分辨荧光斯托克斯位移中的作用。
J Chem Phys. 2015 Nov 7;143(17):174501. doi: 10.1063/1.4934661.