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全力以赴:核剪接体加速非洲锥虫中VSG mRNA的产生

Pedal to the Metal: Nuclear Splicing Bodies Turbo-Charge VSG mRNA Production in African Trypanosomes.

作者信息

Budzak James, Rudenko Gloria

机构信息

Department of Life Sciences, Sir Alexander Fleming Building, Imperial College London, London, United Kingdom.

出版信息

Front Cell Dev Biol. 2022 Apr 20;10:876701. doi: 10.3389/fcell.2022.876701. eCollection 2022.

Abstract

The African trypanosome is a parasite of the mammalian bloodstream and tissues, where an antigenically variable Variant Surface Glycoprotein (VSG) coat protects it from immune attack. This dense layer comprised of ∼10 VSG proteins, makes VSG by far the most abundant mRNA (7-10% total) and protein (∼10% total) in the bloodstream form trypanosome. How can such prodigious amounts of VSG be produced from a single VSG gene? Extremely high levels of RNA polymerase I (Pol I) transcription of the active VSG provide part of the explanation. However, recent discoveries highlight the role of pre-mRNA processing, both in maintaining high levels of VSG transcription, as well as its monoallelic expression. Trypanosome mRNAs are matured through trans-splicing a spliced leader (SL) RNA to the 5' end of precursor transcripts, meaning abundant SL RNA is required throughout the nucleus. However, requirement for SL RNA in the vicinity of the active VSG gene is so intense, that the cell reconfigures its chromatin architecture to facilitate interaction between the SL RNA genes and the active VSG. This presumably ensures that sufficient localised SL RNA is available, and not limiting for VSG mRNA expression. Recently, novel nuclear splicing bodies which appear to provide essential trans-splicing components, have been identified associating with the active VSG. These observations highlight the underappreciated role of pre-mRNA processing in modulating gene expression in trypanosomes. Dissecting the function of these nuclear RNA processing bodies should help us elucidate the mechanisms of both VSG expression and monoallelic exclusion in .

摘要

非洲锥虫是哺乳动物血液和组织中的寄生虫,其表面有一层抗原可变的可变表面糖蛋白(VSG)外衣,可保护它免受免疫攻击。这一由约10种VSG蛋白组成的致密层,使得VSG成为锥虫血液形态中含量最为丰富的mRNA(占总量的7 - 10%)和蛋白质(约占总量的10%)。单个VSG基因是如何产生如此大量的VSG的呢?活跃的VSG基因的RNA聚合酶I(Pol I)转录水平极高,这是部分原因。然而,最近的发现凸显了前体mRNA加工的作用,它不仅维持了VSG的高转录水平,还保证了其单等位基因表达。锥虫mRNA通过将剪接引导(SL)RNA反式剪接到前体转录本的5'端而成熟,这意味着整个细胞核都需要大量的SL RNA。然而,活跃的VSG基因附近对SL RNA的需求极为强烈,以至于细胞会重新配置其染色质结构,以促进SL RNA基因与活跃的VSG之间的相互作用。这大概能确保有足够的局部SL RNA可用,而不会限制VSG mRNA的表达。最近,已鉴定出与活跃的VSG相关联的新型核剪接体,它们似乎提供了关键的反式剪接成分。这些观察结果凸显了前体mRNA加工在调节锥虫基因表达中未被充分认识的作用。剖析这些核RNA加工体的功能应有助于我们阐明锥虫中VSG表达和单等位基因排斥的机制。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6186/9065277/49b3f468979d/fcell-10-876701-g001.jpg

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