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石榴形态化学多样性:基于[具体内容1]和[具体内容2]筛选的计算研究

Pomegranate morpho-chemodiversity: computational investigations based on and screening.

作者信息

Ejjilani Assia, Houmanat Karim, Hanine Hafida, Hssaini Lahcen, Elfazazi Kaoutar, Hernandez Francisca, Hmid Ilham, Razouk Rachid

机构信息

National Institute of Agricultural Research (INRA), Morocco.

Faculty of Sciences and Techniques, Laboratory of Bioprocess and Bio-Interfaces, University of Sutan Moulay Slimane, Beni-Mellal, Morocco.

出版信息

Heliyon. 2022 Apr 27;8(5):e09345. doi: 10.1016/j.heliyon.2022.e09345. eCollection 2022 May.

Abstract

Pomegranate tree is cultivated since ancient times in Morocco, where a high genetic diversity is hosted mainly in traditional agroecosystems. Over the past decade, it regained importance through extension of cultivated area, but remains thus far little valued. To date, its genetic variability and chemodiversity have gone unheeded for many reasons, some of which are related to previous agricultural strategies. In this context, the present study aimed to screen an ex-situ collection of seven local cultivars and seven exotic varieties with regard to 50 fruit morphometric and biochemical descriptors. The results showed statistically significant variability within accessions (p < 0.01), based on all aforementioned traits, except for seed weight, with coefficients of variation greater than 49%. This indicated a high level of phenotypic diversity among the studied genetic pool. The 3D scatter plot built based on the principal component analysis displayed an interesting discrimination with regard to the genotypes' geographic origins with a total variance of about 50%. According to morphometric based-heatmap, four main clusters were identified distinguishing the typicality of some local cultivars compared to exotic varieties, mainly 'Sefri', 'Bzou', 'Chioukhi' and 'Djeibi'. Traits having the highest impact on discrimination between accessions were, by order of importance, fruit weight and its dimensions, juice yield, aril yield, single aril diameter, soluble sugars (glucose and fructose) along with contents in some organic acids, including citric, palmitic, linoleic and malic acids. Potential statistically significant correlations were spotted through bi-dimensional heatmap analysis, particularly between the fruit size, shape and peel traits along with some biochemical attributes. As many areas of the species chemodiversity and functional properties are still needed to be investigated further, the results of the present study are of great interest for the species valorization and for breeding programs.

摘要

石榴树在摩洛哥自古就有种植,该国丰富的遗传多样性主要存在于传统农业生态系统中。在过去十年里,随着种植面积的扩大,石榴树重新受到重视,但迄今为止其价值仍未得到充分发掘。由于多种原因,其遗传变异性和化学多样性一直未受到关注,其中一些原因与以往的农业策略有关。在此背景下,本研究旨在针对50个果实形态计量学和生化描述符,对7个当地品种和7个外来品种的异地种质资源库进行筛选。结果表明,基于除种子重量外的所有上述性状,各种质间存在统计学上的显著变异性(p < 0.01),变异系数大于49%。这表明在所研究的基因库中存在高水平的表型多样性。基于主成分分析构建的三维散点图显示,基因型的地理起源存在有趣的区分,总方差约为50%。根据基于形态计量学的热图,识别出四个主要聚类,区分了一些当地品种与外来品种的典型性,主要是‘Sefri’、‘Bzou’、‘Chioukhi’和‘Djeibi’。对种质间区分影响最大的性状,按重要性排序依次为果实重量及其尺寸、果汁产量、种仁产量、单个种仁直径、可溶性糖(葡萄糖和果糖)以及一些有机酸的含量,包括柠檬酸、棕榈酸、亚油酸和苹果酸。通过二维热图分析发现了潜在的统计学显著相关性,特别是果实大小、形状和果皮性状与一些生化属性之间的相关性。由于该物种化学多样性和功能特性的许多领域仍需进一步研究,本研究结果对于该物种的价值提升和育种计划具有重要意义。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9ed5/9065899/6a6f44f0c407/gr1.jpg

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