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林地棕蝶(Scopoli,1763年)(蛱蝶科:眼蝶亚科)的线粒体全基因组及其系统发育分析

Complete mitochondrial genome of the Woodland Brown, Scopoli, 1763 (Nymphalidae: Satyrinae) and its phylogenetic analysis.

作者信息

Wu Jia-Ling, Bao Ting-Ting, Sun Gang, Xiao Ying, Fang Yan, Shi Qing-Hui

机构信息

Medical Plant Exploitation and Utilization Engineering Research Center, Sanming University, Sanming, P. R. China.

Fujian Provincial Key Laboratory of Resources and Environment Monitoring & Sustainable Management and Utilization, Sanming University, Sanming, P. R. China.

出版信息

Mitochondrial DNA B Resour. 2022 May 3;7(5):747-749. doi: 10.1080/23802359.2022.2070042. eCollection 2022.

DOI:10.1080/23802359.2022.2070042
PMID:35528255
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9068012/
Abstract

In this study, the complete mitochondrial genome (mitogenome) of the Woodland Brown, Scopoli, 1763 (Nymphalidae: Satyrinae) was determined to be 15,284 bp in size, including 37 typical mitochondrial genes and a control region. The gene content and arrangement of the mitogenome are identical to that of the majority of other sequenced nymphalids. All protein-coding genes (PCGs) are started with the conventional ATN codons, except for gene which is initiated by atypical CGA(R) codon. Nine PCGs use a typical stop codon of TAA, whereas the remaining PCGs (, , , ) end with an incomplete T. The length of and are 1333 and 755 bp, respectively, separated by . The phylogenetic tree inferred with Bayesian inference method reveals the phylogenetic relationships among the four tribes of Satyrinae analyzed as ((Satyrini + Melanitini) + (Elymniini + Amathusiini)). The newly sequenced species was clustered together with other two species of Parargina and formed a sister group with two species of the genus within Satyrini.

摘要

在本研究中,1763年命名的林地褐蛱蝶(蛱蝶科:眼蝶亚科)的完整线粒体基因组(线粒体基因组)大小为15284 bp,包括37个典型的线粒体基因和一个控制区。该线粒体基因组的基因内容和排列与大多数其他已测序的蛱蝶相同。所有蛋白质编码基因(PCGs)均以常规的ATN密码子起始,但 基因由非典型的CGA(R)密码子起始。九个PCGs使用典型的TAA终止密码子,而其余的PCGs( 、 、 、 )以不完整的T结尾。 和 的长度分别为1333 bp和755 bp,由 隔开。用贝叶斯推断法推断的系统发育树揭示了所分析的眼蝶亚科四个族之间的系统发育关系为((眼蝶族+眉眼蝶族)+(链眼蝶族+锯眼蝶族))。新测序的物种 与其他两种帕眼蝶属物种聚在一起,并在眼蝶族中与 属的两个物种形成姐妹群。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fdd3/9068012/ee2acca7550a/TMDN_A_2070042_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fdd3/9068012/ee2acca7550a/TMDN_A_2070042_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fdd3/9068012/ee2acca7550a/TMDN_A_2070042_F0001_B.jpg

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