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基于线粒体基因组的蝶类 Lethe 属(鳞翅目,蛱蝶科,弄蝶亚科)14 个完整线粒体基因组及系统发育分析。

Fourteen complete mitochondrial genomes of butterflies from the genus Lethe (Lepidoptera, Nymphalidae, Satyrinae) with mitogenome-based phylogenetic analysis.

机构信息

College of Plant Protection, Hunan Agricultural University, Changsha, Hunan 410128, China; Hunan Provincial Key Laboratory for Biology and Control of Plant Diseases and Insect Pests, Hunan Agricultural University, Nongda Road 1, Furong District, Changsha, Hunan 410128, China.

Systematic Biology Group, Department of Biology, Lund University, Lund, Sweden.

出版信息

Genomics. 2020 Nov;112(6):4435-4441. doi: 10.1016/j.ygeno.2020.07.042. Epub 2020 Aug 1.

Abstract

The mitochondrial genome (mitogenome) can help us understand the phylogenetic relationships within the genus Lethe and the subfamily Satyrinae. In this study, we sequenced the complete mitogenomes of 14 Lethe species, which range in size from 15,225 to 15,271 bp, with both 37 genes (13 PCGs, 22 tRNAs, 2 rRNAs) and a noncoding A + T-rich region. The gene arrangement and orientation is similar to typical mitogenomes of Lepidoptera. The Ka/Ks ratio shows that cox1 has the slowest evolutionary rate. The secondary structure of trnN lacks the Pseudouracil loop (TψC loop) in most Lethe species. The inferred phylogenetic analyses show that Lethe is a well-supported monophyletic group, and reveal 2 major clades within the genus Lethe, which is consistent with previous morphological classifications.

摘要

线粒体基因组(mitogenome)可以帮助我们了解 Lethe 属和 Satyrinae 亚科内部的系统发育关系。在这项研究中,我们对 14 种 Lethe 物种的完整线粒体基因组进行了测序,其大小范围从 15,225 到 15,271bp,均包含 37 个基因(13 个 PCGs、22 个 tRNAs、2 个 rRNAs)和一个非编码 A+T 丰富区。基因排列和方向与鳞翅目昆虫的典型线粒体基因组相似。Ka/Ks 比值表明 cox1 的进化速度最慢。大多数 Lethe 物种的 trnN 的二级结构缺乏假尿嘧啶环(TψC 环)。推断的系统发育分析表明,Lethe 是一个支持良好的单系群,并揭示了属内的 2 个主要分支,这与之前的形态学分类一致。

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