Department of Digestive Medicine, South China Hospital, Health Science Center, Shenzhen University, Shenzhen 518116, China.
Department of Clinic of Internal Medicine, Ulm University, Ulm, Germany.
Dis Markers. 2022 Apr 30;2022:9124216. doi: 10.1155/2022/9124216. eCollection 2022.
Hepatocellular carcinoma (HCC) is one of the most heterogeneous malignancies worldwide with a dismal prognosis. Lack of efficient biomarkers, early detection, and prognosis is still a challenge for HCC. Pyroptosis is a new discovery inflammatory form of programmed cell death. There is growing evidence revealed that pyroptosis plays a role in physiological and pathological conditions of human cancers. However, the prognostic evaluation of these pyroptosis-related genes (PRGs) in HCC remains blank. Consensus clustering of PRGs was used to classify 374 patients with HCC from the TCGA-LIHC cohort. By applying the least absolute shrinkage and selection operator (LASSO) Cox regression method, a 2-gene prognostic gene model (PLCG1 and GSDMC) was built and indicated the survival rate in HCC with medium-to-high accuracy. Then, the median risk score from the TCGA cohort was utilized; the prognostic gene model was also accurate in Gene Expression Omnibus (GEO) cohort. The functional enrichment analysis indicated that the oncogenic properties are associated with prominent hallmarks of cancer. The ssGSEA analyses and TIMER database indicated that immune infiltration tumor microenvironment in the HCC. In conclusion, our findings provide a foundation for further research targeting PRGs and their immune microenvironment.
肝细胞癌(HCC)是全球最具异质性的恶性肿瘤之一,预后不良。缺乏有效的生物标志物、早期检测和预后仍然是 HCC 的挑战。细胞焦亡是一种新发现的细胞程序性死亡的炎症形式。越来越多的证据表明,细胞焦亡在人类癌症的生理和病理条件中发挥作用。然而,这些细胞焦亡相关基因(PRGs)在 HCC 中的预后评估仍然是空白。通过使用 PRGs 的共识聚类对来自 TCGA-LIHC 队列的 374 名 HCC 患者进行分类。通过应用最小绝对收缩和选择算子(LASSO)Cox 回归方法,构建了一个 2 个基因预后基因模型(PLCG1 和 GSDMC),并以中等至高精度表明了 HCC 的生存率。然后,使用 TCGA 队列的中位数风险评分;该预后基因模型在基因表达综合数据库(GEO)队列中也具有准确性。功能富集分析表明,致癌特性与癌症的显著特征有关。ssGSEA 分析和 TIMER 数据库表明 HCC 中的免疫浸润肿瘤微环境。总之,我们的研究结果为进一步研究针对 PRGs 及其免疫微环境提供了基础。