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利用各种β多样性相似性测量值模拟叶部施用铜杀菌剂对土壤微生物组的浸出。

Simulated Leaching of Foliar Applied Copper Bactericides on the Soil Microbiome Utilizing Various Beta Diversity Resemblance Measurements.

机构信息

Department of Plant Pathology, University of Floridagrid.15276.37, Gainesville, Florida, USA.

Department of Entomology and Plant Pathology, Auburn University, Auburn, Alabama, USA.

出版信息

Microbiol Spectr. 2022 Jun 29;10(3):e0148121. doi: 10.1128/spectrum.01481-21. Epub 2022 May 10.

Abstract

Copper bactericides are routinely used to control Xanthomonas perforans (XP), causal agent of bacterial spot of tomato. Given the widespread tolerance to copper in XP strains in FL, USA, nanotechnology-based elemental composites have gained interest for their potential applications in agriculture in part due to their enhanced antimicrobial properties and toxicity to copper-tolerant strains. However, little is known about the potential impact of conventional copper bactericides as well as nano-based elemental composites on soil microbial communities, as determined by high-throughput sequencing of the 16S rDNA. We compared the effects of 2 and 200 μg/mL of core-shell (CS), a metallic copper composite, and a conventional copper bactericide + mancozeb (Cu+Man) on the soil microbiome. These treatments were compared to three controls, the microbial profile of the soil prior to application of copper products, a water application, and spiking the soil with a soilborne phytobacterium, Ralstonia solanacearum (RS). The RS treatment was included to determine if downstream analysis could detect the artificial inoculation. Utilizing multiple β diversity measurements, each emphasizing various tenets of ecology, provided a greater perspective of the effects the treatments had on the microbiome. Analysis of HTS data revealed that the two treatments containing field applied rates of metallic copper, CS 200 and Cu+Man, had the largest impact on the soil microbiome at seven-days posttreatment compared to water. However, we simulated field applied rates of CS 200 entering the soil by treating soil with CS 2 and determined this concentration had a negligible effect on the soil microbiome. Nanotechnology-based elemental composites have gained popularity for their potential applications in plant disease management due to their enhanced antimicrobial properties. However, little is known about their potential impact on the environment. Foliar applications of nano metallic composites upon leaching into the soil have the potential to impact soil microbial populations that in turn influence soil health. Utilizing multiple β diversity measurements, high-throughput sequencing analysis revealed that field applied rates of metallic copper (200 μg/mL) from an advanced copper composite (core-shell [CS]) and a conventional copper bactericide in combination with mancozeb had the largest impact on the soil microbiome compared to water and nontreated control. To simulate leaching from the leaf surface, a lower concentration (2 μg/mL) of CS was also applied to the soil and had a negligible effect on the soil microbiome. Thus, field applied rates of CS may have a minimal effect on soil microbial communities.

摘要

铜杀菌剂通常用于防治美国佛罗里达州的野油菜黄单胞菌(XP),该病菌是番茄细菌性斑点病的病原菌。鉴于 XP 菌株对铜的广泛耐受性,基于纳米技术的元素复合材料因其增强的抗菌特性和对铜耐受菌株的毒性而引起了人们的兴趣,部分原因是其增强的抗菌特性和对铜耐受菌株的毒性。然而,由于高通量测序 16S rDNA 的应用,对于传统铜杀菌剂以及基于纳米技术的元素复合材料对土壤微生物群落的潜在影响知之甚少。我们比较了 2 和 200μg/mL 的核壳(CS)、一种金属铜复合材料和一种常规铜杀菌剂+代森锰锌(Cu+Man)对土壤微生物组的影响。这些处理与三个对照进行了比较,即应用铜产品前土壤的微生物特征、水的应用以及将土壤中一种土传植物病原菌茄青枯雷尔氏菌(RS)接种到土壤中。RS 处理是为了确定下游分析是否能够检测到人工接种。利用多种β多样性测量方法,每种方法都强调生态学的不同原则,为处理对微生物组的影响提供了更全面的视角。HTS 数据分析表明,与水相比,在处理后七天,含有田间施用金属铜的两种处理(CS 200 和 Cu+Man)对土壤微生物组的影响最大。然而,我们通过用 CS 2 处理土壤来模拟田间施用 CS 200 的浓度,结果表明该浓度对土壤微生物组几乎没有影响。基于纳米技术的元素复合材料因其增强的抗菌特性而在植物病害管理中的潜在应用而受到关注。然而,对于它们对环境的潜在影响知之甚少。叶面应用纳米金属复合材料在淋溶到土壤中后,有可能影响土壤微生物种群,进而影响土壤健康。利用多种β多样性测量方法,高通量测序分析表明,与水和未处理对照相比,来自先进铜复合材料(核壳[CS])和传统铜杀菌剂与代森锰锌组合的田间施用金属铜(200μg/mL)的浓度对土壤微生物组的影响最大。为了模拟从叶片表面淋溶,还将较低浓度(2μg/mL)的 CS 施加到土壤中,对土壤微生物组几乎没有影响。因此,CS 的田间施用率可能对土壤微生物群落的影响最小。

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