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分析尿源性. 的质粒接合潜能

Profiling the plasmid conjugation potential of urinary .

机构信息

Department of Microbiology and Immunology, Stritch School of Medicine, Loyola University Chicago, Maywood, IL 60153, USA.

Bioinformatics Program, Loyola University Chicago, Chicago, IL 60660, USA.

出版信息

Microb Genom. 2022 May;8(5). doi: 10.1099/mgen.0.000814.

DOI:10.1099/mgen.0.000814
PMID:35536743
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9465074/
Abstract

is often associated with urinary tract infection (UTI). Antibiotic resistance in is an ongoing challenge in managing UTI. Extrachromosomal elements - plasmids - are vectors for clinically relevant traits, such as antibiotic resistance, with conjugation being one of the main methods for horizontal propagation of plasmids in bacterial populations. Targeting of conjugation components has been proposed as a strategy to curb the spread of plasmid-borne antibiotic resistance. Understanding the types of conjugative systems present in urinary isolates is fundamental to assessing the viability of this strategy. In this study, we profile two well-studied conjugation systems (F-type and P-type) in the draft genomes of 65 urinary isolates of obtained from the bladder urine of adult women with and without UTI-like symptoms. Most of these isolates contained plasmids and we found that conjugation genes were abundant/ubiquitous, diverse and often associated with IncF plasmids. To validate conjugation of these urinary plasmids, the plasmids from two urinary isolates, UMB1223 (predicted to have F-type genes) and UMB1284 (predicted to have P-type genes), were transferred by conjugation into the K-12 strain MG1655. Overall, the findings of this study support the notion that care should be taken in targeting any individual component of a urinary isolate's conjugation system, given the inherent mechanistic redundancy, gene diversity and different types of conjugation systems in this population.

摘要

常与尿路感染(UTI)相关。 在治疗 UTI 时,对抗生素的耐药性是一个持续存在的挑战。 染色体外元件-质粒-是临床相关特征(如抗生素耐药性)的载体,接合是细菌种群中质粒水平传播的主要方法之一。 靶向接合成分已被提议作为遏制质粒携带抗生素耐药性传播的策略。 了解尿分离株中存在的接合系统类型对于评估该策略的可行性至关重要。 在这项研究中,我们在从有和无症状 UTI 样症状的成年女性膀胱尿液中获得的 65 株 的草图基因组中分析了两种研究充分的接合系统(F 型和 P 型)。 这些分离株大多数都含有质粒,我们发现接合基因丰富/普遍存在,多样化且通常与 IncF 质粒相关。 为了验证这些尿液质粒的接合,从两个尿液分离株 UMB1223(预测具有 F 型基因)和 UMB1284(预测具有 P 型基因)中转移质粒通过接合进入 K-12 菌株 MG1655。 总的来说,这项研究的结果支持这样一种观点,即应该谨慎对待针对尿液 分离株接合系统的任何单个成分,因为该群体中存在固有的机制冗余、基因多样性和不同类型的接合系统。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ba89/9465074/c222cfe36629/mgen-8-814-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ba89/9465074/0720544ba422/mgen-8-814-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ba89/9465074/34629a336479/mgen-8-814-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ba89/9465074/c222cfe36629/mgen-8-814-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ba89/9465074/0720544ba422/mgen-8-814-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ba89/9465074/34629a336479/mgen-8-814-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ba89/9465074/c222cfe36629/mgen-8-814-g003.jpg

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Genes (Basel). 2020 Oct 22;11(11):1239. doi: 10.3390/genes11111239.
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Genomic Survey of From the Bladders of Women With and Without Lower Urinary Tract Symptoms.有和无下尿路症状女性膀胱的基因组调查
Front Microbiol. 2020 Sep 4;11:2094. doi: 10.3389/fmicb.2020.02094. eCollection 2020.
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Protein Dynamics in F-like Bacterial Conjugation.F 类细菌接合中的蛋白质动力学
Biomedicines. 2020 Sep 19;8(9):362. doi: 10.3390/biomedicines8090362.
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