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一种高抗性三爱镉特异性蛋白质组学反应

Cadmium specific proteomic responses of a highly resistant san ai.

作者信息

Izrael-Živković Lidija, Rikalović Milena, Gojgić-Cvijović Gordana, Kazazić Saša, Vrvić Miroslav, Brčeski Ilija, Beškoski Vladimir, Lončarević Branka, Gopčević Kristina, Karadžić Ivanka

机构信息

Department of Chemistry, Faculty of Medicine, University of Belgrade Visegradska 26 Belgrade Serbia

Faculty of Applied Ecology Futura, University of Singidunum Belgrade Serbia.

出版信息

RSC Adv. 2018 Mar 16;8(19):10549-10560. doi: 10.1039/c8ra00371h. eCollection 2018 Mar 13.

Abstract

san ai is a promising candidate for bioremediation of cadmium pollution, as it resists a high concentration of up to 7.2 mM of cadmium. Leaving biomass of san ai exposed to cadmium has a large biosorption potential, implying its capacity to extract heavy metal from contaminated medium. In the present study, we investigated tolerance and accumulation of cadmium on protein level by shotgun proteomics approach based on liquid chromatography and tandem mass spectrometry coupled with bioinformatics to identify proteins. Size exclusion chromatography was used for protein prefractionation to preserve native forms of metalloproteins and protein complexes. Using this approach a total of 60 proteins were observed as up-regulated in cadmium-amended culture. Almost a third of the total numbers of up-regulated were metalloproteins. Particularly interesting are denitrification proteins which are over expressed but not active, suggesting their protective role in conditions of heavy metal exposure. san ai developed a complex mechanism to adapt to cadmium, based on: extracellular biosorption, bioaccumulation, the formation of biofilm, controlled siderophore production, enhanced respiration and modified protein profile. An increased abundance of proteins involved in: cell energy metabolism, including denitrification proteins; amino acid metabolism; cell motility and posttranslational modifications, primarily based on thiol-disulfide exchange, were observed. Enhanced oxygen consumption of biomass in cadmium-amended culture control was found. Our results signify that san ai is naturally well equipped to overcome and survive high doses of cadmium and, as such, has a great potential for application in bioremediation of cadmium polluted sites.

摘要

三爱(San ai)是镉污染生物修复的一个有前景的候选者,因为它能耐受高达7.2 mM的高浓度镉。将三爱的生物质暴露于镉环境中具有很大的生物吸附潜力,这意味着它有从受污染介质中提取重金属的能力。在本研究中,我们通过基于液相色谱和串联质谱联用生物信息学的鸟枪法蛋白质组学方法,从蛋白质水平研究了镉的耐受性和积累情况,以鉴定蛋白质。尺寸排阻色谱用于蛋白质预分级,以保留金属蛋白和蛋白质复合物的天然形式。使用这种方法,共观察到60种蛋白质在镉处理的培养物中上调表达。上调表达的蛋白质总数中几乎三分之一是金属蛋白。特别有趣的是反硝化蛋白,它们过度表达但无活性,这表明它们在重金属暴露条件下具有保护作用。三爱发展出了一种复杂的机制来适应镉,该机制基于:细胞外生物吸附、生物积累、生物膜形成、受控制的铁载体产生、增强的呼吸作用以及蛋白质谱的改变。观察到参与以下方面的蛋白质丰度增加:细胞能量代谢,包括反硝化蛋白;氨基酸代谢;细胞运动性和翻译后修饰,主要基于硫醇-二硫键交换。在镉处理的培养物对照中发现生物质的氧气消耗增加。我们的结果表明,三爱天然具备克服高剂量镉并存活的能力,因此在镉污染场地的生物修复中具有巨大的应用潜力。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1c68/9078880/e318032df425/c8ra00371h-f1.jpg

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