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鉴定核昔菌素生物合成过程中磺酰胺和氟掺入所必需的基因。

Identification of Genes Essential for Sulfamate and Fluorine Incorporation During Nucleocidin Biosynthesis.

机构信息

Department of Chemistry, Queen's University, 90 Bader Ln, Kingston, ON K7L 2S8, Canada.

Department of Pharmaceutical Biology and Biotechnology, Institute of Pharmaceutical Sciences, Albert-Ludwigs-Universität Freiburg, Stefan-Meier-Str. 19, 79104, Freiburg i. Br., Germany.

出版信息

Chembiochem. 2022 Aug 3;23(15):e202200140. doi: 10.1002/cbic.202200140. Epub 2022 May 24.

Abstract

Nucleocidin is an adenosine derivative containing 4'-fluoro and 5'-O-sulfamoyl substituents. In this study, nucleocidin biosynthesis is examined in two newly discovered producers, Streptomyces virens B-24331 and Streptomyces aureorectus B-24301, which produce nucleocidin and related derivatives at titers 30-fold greater than S. calvus. This enabled the identification of two new O-acetylated nucleocidin derivatives, and a potential glycosyl-O-acetyltransferase. Disruption of nucJ, nucG, and nucI, within S. virens B-24331, specifying a radical SAM/Fe-S dependent enzyme, sulfatase, and arylsulfatase, respectively, led to loss of 5'-O-sulfamoyl biosynthesis, but not fluoronucleoside production. Disruption of nucN, nucK, and nucO specifying an amidinotransferase, and two sulfotransferases respectively, led to loss of fluoronucleoside production. Identification of S. virens B-24331 as a genetically tractable and high producing strain sets the stage for understanding nucleocidin biosynthesis and highlights the utility of using 16S-RNA sequences to identify alternative producers of valuable compounds in the absence of genome sequence data.

摘要

核菌素是一种含有 4'-氟和 5'-O-磺酰基取代基的腺嘌呤衍生物。在这项研究中,在两个新发现的产生菌中检查了核菌素的生物合成,它们是链霉菌属 virens B-24331 和链霉菌属 aureorectus B-24301,它们产生的核菌素和相关衍生物的产量比 S. calvus 高 30 倍。这使得能够鉴定出两种新的 O-乙酰化核菌素衍生物,以及一种潜在的糖基-O-乙酰转移酶。在链霉菌属 virens B-24331 中,破坏 nucJ、nucG 和 nucI,分别指定一种依赖于自由基 SAM/Fe-S 的酶、磺基酶和芳基磺基酶,导致 5'-O-磺酰基生物合成丧失,但氟核苷的产生不受影响。破坏 nucN、nucK 和 nucO,分别指定酰胺基转移酶和两种磺基转移酶,导致氟核苷的产生丧失。将链霉菌属 virens B-24331 鉴定为一种遗传上可操作且高产的菌株,为了解核菌素生物合成奠定了基础,并强调了在缺乏基因组序列数据的情况下,使用 16S-RNA 序列来鉴定有价值化合物的替代产生菌的实用性。

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