Benz Roland
Department of Life Sciences and Chemistry, Jacobs University Bremen, Bremen, Germany.
Front Physiol. 2021 Oct 26;12:734226. doi: 10.3389/fphys.2021.734226. eCollection 2021.
Eukaryotic porin, also known as Voltage-Dependent Anion Channel (VDAC), is the most frequent protein in the outer membrane of mitochondria that are responsible for cellular respiration. Mitochondria are most likely descendants of strictly aerobic Gram-negative bacteria from the α-proteobacterial lineage. In accordance with the presumed ancestor, mitochondria are surrounded by two membranes. The mitochondrial outer membrane contains besides the eukaryotic porins responsible for its major permeability properties a variety of other not fully identified channels. It encloses also the TOM apparatus together with the sorting mechanism SAM, responsible for the uptake and assembly of many mitochondrial proteins that are encoded in the nucleus and synthesized in the cytoplasm at free ribosomes. The recognition and the study of electrophysiological properties of eukaryotic porin or VDAC started in the late seventies of the last century by a study of Schein et al., who reconstituted the pore from crude extracts of mitochondria into planar lipid bilayer membranes. Whereas the literature about structure and function of eukaryotic porins was comparatively rare during the first 10years after the first study, the number of publications started to explode with the first sequencing of human Porin 31HL and the recognition of the important function of eukaryotic porins in mitochondrial metabolism. Many genomes contain more than one gene coding for homologs of eukaryotic porins. More than 100 sequences of eukaryotic porins are known to date. Although the sequence identity between them is relatively low, the polypeptide length and in particular, the electrophysiological characteristics are highly preserved. This means that all eukaryotic porins studied to date are anion selective in the open state. They are voltage-dependent and switch into cation-selective substates at voltages in the physiological relevant range. A major breakthrough was also the elucidation of the 3D structure of the eukaryotic pore, which is formed by 19 β-strands similar to those of bacterial porin channels. The function of the presumed gate an α-helical stretch of 20 amino acids allowed further studies with respect to voltage dependence and function, but its exact role in channel gating is still not fully understood.
真核孔蛋白,也被称为电压依赖性阴离子通道(VDAC),是线粒体外膜中最常见的蛋白质,线粒体负责细胞呼吸。线粒体很可能是来自α-变形菌谱系的严格需氧革兰氏阴性细菌的后代。根据推测的祖先,线粒体被两层膜包围。线粒体外膜除了含有负责其主要通透性的真核孔蛋白外,还含有多种其他尚未完全鉴定的通道。它还包围着TOM装置以及分选机制SAM,负责许多在细胞核中编码并在细胞质中游离核糖体上合成的线粒体蛋白的摄取和组装。真核孔蛋白或VDAC电生理特性的识别和研究始于上世纪七十年代后期,由Schein等人进行的一项研究,他们将线粒体粗提物中的孔重建到平面脂质双分子层膜中。在首次研究后的头10年里,关于真核孔蛋白结构和功能的文献相对较少,随着人类孔蛋白31HL的首次测序以及对真核孔蛋白在线粒体代谢中重要功能的认识,出版物数量开始激增。许多基因组包含不止一个编码真核孔蛋白同源物的基因。迄今为止,已知超过100个真核孔蛋白序列。尽管它们之间的序列同一性相对较低,但多肽长度,特别是电生理特性高度保守。这意味着迄今为止研究的所有真核孔蛋白在开放状态下都是阴离子选择性的。它们是电压依赖性的,并在生理相关电压范围内转换为阳离子选择性亚状态。一个重大突破也是真核孔三维结构的阐明,它由19条β链形成,类似于细菌孔蛋白通道的β链。推测的门控结构——一段20个氨基酸的α螺旋伸展——的功能使得关于电压依赖性和功能的进一步研究成为可能,但其在通道门控中的确切作用仍未完全理解。