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来自(J.F.Gmel.)M.R.阿尔梅达(柿科)一个栽培品种的完整质体基因组序列:一种在中国海南省种植的具有高经济价值的营养果树。

Complete plastome sequence from a cultivar of (J.F.Gmel.) M.R. Almeida (Ebenaceae): a nutritious fruit tree with high economic value cultivated in Hainan province, China.

作者信息

Xin-Xin Xu, Wang Hong-Xin, Chen Da-Juan, Ke Xiu-Rong, Zhu Zhi-Xin, Wang Hua-Feng

机构信息

Hainan Key Laboratory for Sustainable Utilization of Tropical Bioresources, College of Tropical Crops, Hainan University, Haikou, China.

Zhai Mingguo Academician Work Station, Sanya University, Sanya, China.

出版信息

Mitochondrial DNA B Resour. 2022 May 9;7(5):789-790. doi: 10.1080/23802359.2022.2072243. eCollection 2022.

Abstract

(J.F.Gmel.) M.R.Almeida is a rare tree in the family Ebenaceae. The species is native to South America, while having been introduced to Florida and Texas (USA), India, Java and Madagascar. Additionally, this species is distributed in Guangdong Province and the southwest portion of Hainan Province, China. Here, we report and characterize the complete plastome of a cultivar of The length of the complete plastome is 157,168 bp, including 131 genes consisting of 84 protein-coding genes, 37 tRNA genes and 8 rRNA genes. The plastome has the typical structure and gene content of angiosperms, including two inverted repeat (IR) regions of 26,095 bp, a large single copy (LSC) region of 86,610 bp and a small single-copy (SSC) region of 18,386 bp. The total G/C content of the plastome in is 37.4%. The complete plastome sequence of will make contributions to the conservation genetics of the species, as well as to phylogenetic studies in Ebenaceae.

摘要

(J.F. 格梅尔)M.R. 阿尔梅达树是柿科一种珍稀树木。该物种原产于南美洲,已被引入美国佛罗里达州和得克萨斯州、印度、爪哇和马达加斯加。此外,该物种在中国广东省和海南省西南部也有分布。在此,我们报道并描述了一个该品种的完整质体基因组。完整质体基因组长度为157,168 bp,包括131个基因,其中有84个蛋白质编码基因、37个tRNA基因和8个rRNA基因。该质体基因组具有被子植物典型的结构和基因组成,包括两个26,095 bp的反向重复(IR)区域、一个86,610 bp的大单拷贝(LSC)区域和一个18,386 bp的小单拷贝(SSC)区域。该物种质体基因组的总G/C含量为37.4%。该物种完整质体基因组序列将为该物种的保护遗传学以及柿科的系统发育研究做出贡献。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2dd1/9090366/452ba0ed4a70/TMDN_A_2072243_F0001_B.jpg

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