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1885年汉斯(樟科)叶绿体全基因组序列及注释

Complete chloroplast genome sequence and annotation of Hance, 1885 (lauraceae).

作者信息

Xiaoxuan Long, Shi Wenbo, Song Weicai, Han Weiqi, Yang Guiwen, Wang Shuo

机构信息

College of Marine Science and Biological Engineering, Qingdao University of Science and Technology, Qingdao, China.

Shandong Provincial Key Laboratory of Animal Resistance Biology, College of Life Sciences, Shandong Normal University, Jinan, Shandong, China.

出版信息

Mitochondrial DNA B Resour. 2022 May 4;7(5):780-782. doi: 10.1080/23802359.2022.2068981. eCollection 2022.

DOI:10.1080/23802359.2022.2068981
PMID:35558181
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9090370/
Abstract

Hance, 1885 is a species of flowering plant in the family Lauraceae and is mainly found at low altitudes in southern China. In this study, we assembled and annotated the complete chloroplast genome of for the first time. We analyzed the general features of and constructed a phylogenetic tree based on 15 Lauraceae species. The chloroplast genome of had a total length of 153,943 bp. The length of a large single copy region, a small single copy region, and two inverted repeat regions were 93,689 bp, 20,070 bp, and 20,092bp, respectively. A total of 128 genes were detected, which included 84 protein-coding genes, 36 tRNAs and 8 rRNAs. The GC content of complete chloroplast genome was 39.1%. The phylogenetic tree indicated that was closely related to .

摘要

1885年的Hance是樟科的一种开花植物,主要分布于中国南方的低海拔地区。在本研究中,我们首次组装并注释了其完整的叶绿体基因组。我们分析了其一般特征,并基于15个樟科物种构建了系统发育树。Hance的叶绿体基因组全长153,943 bp。大单拷贝区域、小单拷贝区域和两个反向重复区域的长度分别为93,689 bp、20,070 bp和20,092bp。共检测到128个基因,其中包括84个蛋白质编码基因、36个tRNA和8个rRNA。Hance完整叶绿体基因组的GC含量为39.1%。系统发育树表明,Hance与[某物种]关系密切。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1e5b/9090370/a8cf07f3fdf3/TMDN_A_2068981_F0001_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1e5b/9090370/a8cf07f3fdf3/TMDN_A_2068981_F0001_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1e5b/9090370/a8cf07f3fdf3/TMDN_A_2068981_F0001_C.jpg

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