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一种新型小 RNA(DsrO)在抗辐射球菌中促进甲硫氨酸亚砜还原酶(Msr)表达以适应氧化应激。

A Novel Small RNA, DsrO, in Deinococcus radiodurans Promotes Methionine Sulfoxide Reductase () Expression for Oxidative Stress Adaptation.

机构信息

Single Cell Research Center, School of Agriculture and Life Sciences, Shanghai Jiao Tong Universitygrid.16821.3c, Shanghai, China.

Biotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, China.

出版信息

Appl Environ Microbiol. 2022 Jun 14;88(11):e0003822. doi: 10.1128/aem.00038-22. Epub 2022 May 16.

Abstract

Reactive oxygen species (ROS) can cause destructive damage to biological macromolecules and protein dysfunction in bacteria. Methionine sulfoxide reductase (Msr) with redox-active Cys and/or seleno-cysteine (Sec) residues can restore physiological functions of the proteome, which is essential for oxidative stress tolerance of the extremophile Deinococcus radiodurans. However, the underlying mechanism regulating MsrA enzyme activity in D. radiodurans under oxidative stress has remained elusive. Here, we identified the function of MsrA in response to oxidative stress. expression in D. radiodurans was significantly upregulated under oxidative stress. The mutant showed a deficiency in antioxidative capacity and an increased level of dabsyl-Met-S-SO, indicating increased sensitivity to oxidative stress. Moreover, mRNA was posttranscriptionally regulated by a small RNA, DsrO. Analysis of the molecular interaction between DsrO and mRNA demonstrated that DsrO increased the half-life of mRNA and then upregulated MsrA enzyme activity under oxidative stress compared to the wild type. expression was also transcriptionally regulated by the DNA-repairing regulator DrRRA, providing a connection for further analysis of protein restoration during DNA repair. Overall, our results provide direct evidence that DsrO and DrRRA regulate expression at two levels to stabilize mRNA and increase MsrA protein levels, revealing the protective roles of DsrO signaling in D. radiodurans against oxidative stress. The repair of oxidized proteins is an indispensable function allowing the extremophile D. radiodurans to grow in adverse environments. Msr proteins and various oxidoreductases can reduce oxidized Cys and Met amino acid residues of damaged proteins to recover protein function. Consequently, it is important to investigate the molecular mechanism maintaining the high reducing activity of MsrA protein in D. radiodurans during stresses. Here, we showed the protective roles of an sRNA, DsrO, in D. radiodurans against oxidative stress. DsrO interacts with mRNA to improve mRNA stability, and this increases the amount of MsrA protein. In addition, we also showed that DrRRA transcriptionally regulated gene expression. Due to the importance of DrRRA in regulating DNA repair, this study provides a clue for further analysis of MsrA activity during DNA repair. This study indicates that protecting proteins from oxidation is an effective strategy for extremophiles to adapt to stress conditions.

摘要

活性氧(ROS)可导致细菌生物大分子的破坏性损伤和蛋白质功能障碍。具有氧化还原活性半胱氨酸(Cys)和/或硒代半胱氨酸(Sec)残基的甲硫氨酸亚砜还原酶(Msr)可以恢复蛋白质组的生理功能,这对于耐辐射球菌(Deinococcus radiodurans)的氧化应激耐受至关重要。然而,在氧化应激下调节耐辐射球菌 MsrA 酶活性的潜在机制仍不清楚。在这里,我们确定了 MsrA 在应对氧化应激中的功能。耐辐射球菌中 MsrA 的表达在氧化应激下显著上调。突变体表现出抗氧化能力缺陷和 dabsyl-Met-S-SO 水平增加,表明对氧化应激的敏感性增加。此外,DsrO 通过小 RNA 对 MsrA 进行转录后调控。DsrO 与 mRNA 分子相互作用的分析表明,与野生型相比,DsrO 增加了 mRNA 的半衰期,然后在氧化应激下上调 MsrA 酶活性。DsrO 还通过 DNA 修复调节剂 DrRRA 进行转录调控,为进一步分析 DNA 修复过程中的蛋白质修复提供了连接。总的来说,我们的结果提供了直接证据,表明 DsrO 和 DrRRA 通过两个水平调节 的表达,稳定 mRNA 并增加 MsrA 蛋白水平,揭示了 DsrO 信号在耐辐射球菌抵御氧化应激中的保护作用。氧化蛋白的修复是一种必不可少的功能,使极端微生物耐辐射球菌能够在不利的环境中生长。Msr 蛋白和各种氧化还原酶可以将受损蛋白质中氧化的半胱氨酸和甲硫氨酸残基还原为恢复蛋白质功能。因此,研究在应激过程中维持耐辐射球菌 MsrA 蛋白高还原活性的分子机制非常重要。在这里,我们展示了 sRNA DsrO 在耐辐射球菌抵御氧化应激中的保护作用。DsrO 与 mRNA 相互作用以提高 mRNA 的稳定性,从而增加 MsrA 蛋白的数量。此外,我们还表明 DrRRA 转录调控 基因表达。由于 DrRRA 在调节 DNA 修复中的重要性,本研究为进一步分析 DNA 修复过程中 MsrA 活性提供了线索。本研究表明,防止蛋白质氧化是极端微生物适应应激条件的有效策略。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0dc0/9195949/c17fad3cd41c/aem.00038-22-f001.jpg

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