• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

无细胞蛋白质合成技术在新型偶氮还原酶及其最佳电子供体筛选中的应用

Cell-Free Protein Synthesis for the Screening of Novel Azoreductases and Their Preferred Electron Donor.

机构信息

Department of Biochemical and Chemical Engineering, Chair for Bioprocess Engineering, TU Dortmund University, Emil-Figge-Str. 66, 44227, Dortmund, Germany.

Microbial Biotechnology, Faculty of Biology and Biotechnology, Ruhr-Universität Bochum, Universitätsstr. 150, 44780, Bochum, Germany.

出版信息

Chembiochem. 2022 Aug 3;23(15):e202200121. doi: 10.1002/cbic.202200121. Epub 2022 Jun 16.

DOI:10.1002/cbic.202200121
PMID:35593146
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9401864/
Abstract

Azoreductases are potent biocatalysts for the cleavage of azo bonds. Various gene sequences coding for potential azoreductases are available in databases, but many of their gene products are still uncharacterized. To avoid the laborious heterologous expression in a host organism, we developed a screening approach involving cell-free protein synthesis (CFPS) combined with a colorimetric activity assay, which allows the parallel screening of putative azoreductases in a short time. First, we evaluated different CFPS systems and optimized the synthesis conditions of a model azoreductase. With the findings obtained, 10 azoreductases, half of them undescribed so far, were screened for their ability to degrade the azo dye methyl red. All novel enzymes catalyzed the degradation of methyl red and can therefore be referred to as azoreductases. In addition, all enzymes degraded the more complex and bulkier azo dye Brilliant Black and four of them also showed the ability to reduce p-benzoquinone. NADH was the preferred electron donor for the most enzymes, although the synthetic nicotinamide co-substrate analogue 1-benzyl-1,4-dihydronicotinamide (BNAH) was also accepted by all active azoreductases. This screening approach allows accelerated identification of potential biocatalysts for various applications.

摘要

偶氮还原酶是一种强有力的生物催化剂,可用于裂解偶氮键。数据库中提供了各种潜在偶氮还原酶的基因序列,但它们的许多基因产物仍未被表征。为了避免在宿主生物中进行繁琐的异源表达,我们开发了一种涉及无细胞蛋白质合成 (CFPS) 与比色活性测定相结合的筛选方法,可在短时间内平行筛选潜在的偶氮还原酶。首先,我们评估了不同的 CFPS 系统,并优化了模型偶氮还原酶的合成条件。根据研究结果,我们筛选了 10 种偶氮还原酶,其中一半迄今尚未描述,以评估它们降解偶氮染料甲基红的能力。所有新发现的酶都能催化甲基红的降解,因此可以被称为偶氮还原酶。此外,所有酶都能降解更复杂和更大体积的偶氮染料亮黑,其中 4 种酶还具有还原对苯醌的能力。NADH 是大多数酶的首选电子供体,尽管合成的烟酰胺辅酶类似物 1-苄基-1,4-二氢烟酰胺 (BNAH) 也被所有具有活性的偶氮还原酶所接受。这种筛选方法可加速鉴定各种应用的潜在生物催化剂。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8ae4/9401864/c837ce8d7ce9/CBIC-23-0-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8ae4/9401864/e7137bb7078e/CBIC-23-0-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8ae4/9401864/ec525d141c12/CBIC-23-0-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8ae4/9401864/65c98402d0cf/CBIC-23-0-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8ae4/9401864/97517c3865e3/CBIC-23-0-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8ae4/9401864/6305474c6314/CBIC-23-0-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8ae4/9401864/a89848257d6e/CBIC-23-0-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8ae4/9401864/c837ce8d7ce9/CBIC-23-0-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8ae4/9401864/e7137bb7078e/CBIC-23-0-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8ae4/9401864/ec525d141c12/CBIC-23-0-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8ae4/9401864/65c98402d0cf/CBIC-23-0-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8ae4/9401864/97517c3865e3/CBIC-23-0-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8ae4/9401864/6305474c6314/CBIC-23-0-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8ae4/9401864/a89848257d6e/CBIC-23-0-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8ae4/9401864/c837ce8d7ce9/CBIC-23-0-g001.jpg

相似文献

1
Cell-Free Protein Synthesis for the Screening of Novel Azoreductases and Their Preferred Electron Donor.无细胞蛋白质合成技术在新型偶氮还原酶及其最佳电子供体筛选中的应用
Chembiochem. 2022 Aug 3;23(15):e202200121. doi: 10.1002/cbic.202200121. Epub 2022 Jun 16.
2
Recent advances in azo dye degrading enzyme research.偶氮染料降解酶研究的最新进展
Curr Protein Pept Sci. 2006 Apr;7(2):101-11. doi: 10.2174/138920306776359786.
3
Revealing the degrading-possibility of methyl red by two azoreductases of Anoxybacillus sp. PDR2 based on molecular docking.基于分子对接揭示嗜热栖热放线菌PDR2的两种偶氮还原酶对甲基红的降解可能性
Chemosphere. 2024 Mar;351:141173. doi: 10.1016/j.chemosphere.2024.141173. Epub 2024 Jan 15.
4
Changing the electron donor improves azoreductase dye degrading activity at neutral pH.改变电子供体可提高中性pH条件下偶氮还原酶对染料的降解活性。
Enzyme Microb Technol. 2017 May;100:17-19. doi: 10.1016/j.enzmictec.2017.02.003. Epub 2017 Feb 9.
5
Biochemical characterization of a novel azoreductase from Streptomyces sp.: Application in eco-friendly decolorization of azo dye wastewater.新型链霉菌偶氮还原酶的生化特性:在环保型偶氮染料废水脱色中的应用。
Int J Biol Macromol. 2019 Nov 1;140:1037-1046. doi: 10.1016/j.ijbiomac.2019.08.196. Epub 2019 Aug 23.
6
Cloning and characterization of FMN-dependent azoreductases from textile industry effluent identified through metagenomic sequencing.通过宏基因组测序从纺织工业废水中鉴定出依赖 FMN 的偶氮还原酶的克隆和特性。
J Air Waste Manag Assoc. 2024 May;74(5):335-344. doi: 10.1080/10962247.2024.2322513. Epub 2024 Apr 23.
7
Remarkable diversification of bacterial azoreductases: primary sequences, structures, substrates, physiological roles, and biotechnological applications.细菌偶氮还原酶的显著多样化:主要序列、结构、底物、生理作用和生物技术应用。
Appl Microbiol Biotechnol. 2019 May;103(10):3965-3978. doi: 10.1007/s00253-019-09775-2. Epub 2019 Apr 3.
8
Purification and identification of an FMN-dependent NAD(P)H azoreductase from Enterococcus faecalis.粪肠球菌中一种黄素单核苷酸依赖性烟酰胺腺嘌呤二核苷酸(磷酸)偶氮还原酶的纯化与鉴定
Curr Issues Mol Biol. 2009;11(2):59-65.
9
Structures of AzrA and of AzrC complexed with substrate or inhibitor: insight into substrate specificity and catalytic mechanism.与底物或抑制剂复合的AzrA和AzrC的结构:对底物特异性和催化机制的深入了解。
Acta Crystallogr D Biol Crystallogr. 2014 Feb;70(Pt 2):553-64. doi: 10.1107/S1399004713030988. Epub 2014 Jan 31.
10
Identification of Enterococcus faecalis enzymes with azoreductases and/or nitroreductase activity.粪肠球菌中具有偶氮还原酶和/或硝基还原酶活性的酶的鉴定。
BMC Microbiol. 2017 May 25;17(1):126. doi: 10.1186/s12866-017-1033-3.

引用本文的文献

1
Developing an -Based Cell-Free Protein Synthesis System for Artificial Spidroin Production and Characterization.开发一种用于人工蜘蛛丝蛋白生产和表征的基于-的无细胞蛋白质合成系统。 你提供的原文中“-Based”部分似乎不完整,存在信息缺失情况,可能会影响对整体内容的准确理解。
ACS Synth Biol. 2025 May 16;14(5):1829-1842. doi: 10.1021/acssynbio.5c00241. Epub 2025 Apr 21.
2
Cell-Free Gene Expression: Methods and Applications.无细胞基因表达:方法与应用
Chem Rev. 2025 Jan 8;125(1):91-149. doi: 10.1021/acs.chemrev.4c00116. Epub 2024 Dec 19.
3
Applications of cell free protein synthesis in protein design.

本文引用的文献

1
Optimizing Cell-Free Protein Synthesis for Increased Yield and Activity of Colicins.优化无细胞蛋白质合成以提高大肠杆菌素的产量和活性
Methods Protoc. 2019 Apr 11;2(2):28. doi: 10.3390/mps2020028.
2
Improving Biocatalytic Properties of an Azoreductase via the N-Terminal Fusion of Formate Dehydrogenase.通过甲酸脱氢酶的 N 端融合来提高偶氮还原酶的生物催化性能。
Chembiochem. 2022 Mar 18;23(6):e202100643. doi: 10.1002/cbic.202100643. Epub 2022 Feb 10.
3
Identification of molecular basis that underlie enzymatic specificity of AzoRo from Rhodococcus opacus 1CP: A potential NADH:quinone oxidoreductase.
无细胞蛋白质合成在蛋白质设计中的应用。
Protein Sci. 2024 Sep;33(9):e5148. doi: 10.1002/pro.5148.
4
Discovery and biochemical characterization of thermostable glycerol oxidases.耐热甘油氧化酶的发现和生化特性研究。
Appl Microbiol Biotechnol. 2024 Dec;108(1):61. doi: 10.1007/s00253-023-12883-9. Epub 2024 Jan 6.
5
Vesicle-based cell-free synthesis of short and long unspecific peroxygenases.基于囊泡的短链和长链非特异性过氧酶的无细胞合成。
Front Bioeng Biotechnol. 2022 Nov 1;10:964396. doi: 10.3389/fbioe.2022.964396. eCollection 2022.
鉴定红游动球菌 1CP 中 AzoRo 酶的分子基础:一种潜在的 NADH:醌氧化还原酶的酶特异性。
Arch Biochem Biophys. 2022 Mar 15;717:109123. doi: 10.1016/j.abb.2022.109123. Epub 2022 Jan 19.
4
A Multiplexed Cell-Free Assay to Screen for Antimicrobial Peptides in Double Emulsion Droplets.一种用于在双乳液液滴中筛选抗菌肽的多重无细胞分析方法。
Angew Chem Int Ed Engl. 2022 Mar 21;61(13):e202114632. doi: 10.1002/anie.202114632. Epub 2022 Feb 9.
5
Effective Use of Linear DNA in Cell-Free Expression Systems.线性DNA在无细胞表达系统中的有效应用。
Front Bioeng Biotechnol. 2021 Jul 20;9:715328. doi: 10.3389/fbioe.2021.715328. eCollection 2021.
6
Application of Cell-Free Protein Synthesis System for the Biosynthesis of l-Theanine.无细胞蛋白质合成系统在 l-茶氨酸生物合成中的应用。
ACS Synth Biol. 2021 Mar 19;10(3):620-631. doi: 10.1021/acssynbio.0c00618. Epub 2021 Mar 10.
7
UniProt: the universal protein knowledgebase in 2021.UniProt:2021 年的通用蛋白质知识库。
Nucleic Acids Res. 2021 Jan 8;49(D1):D480-D489. doi: 10.1093/nar/gkaa1100.
8
Screening and Identification of Novel cGAS Homologues Using a Combination of in Vitro and In Vivo Protein Synthesis.利用体外和体内蛋白质合成相结合的方法筛选和鉴定新型 cGAS 同源物。
Int J Mol Sci. 2019 Dec 22;21(1):105. doi: 10.3390/ijms21010105.
9
Remarkable diversification of bacterial azoreductases: primary sequences, structures, substrates, physiological roles, and biotechnological applications.细菌偶氮还原酶的显著多样化:主要序列、结构、底物、生理作用和生物技术应用。
Appl Microbiol Biotechnol. 2019 May;103(10):3965-3978. doi: 10.1007/s00253-019-09775-2. Epub 2019 Apr 3.
10
Constructive approach for synthesis of a functional IgG using a reconstituted cell-free protein synthesis system.利用重建的无细胞蛋白合成系统合成功能性 IgG 的构建方法。
Sci Rep. 2019 Jan 24;9(1):671. doi: 10.1038/s41598-018-36691-8.