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hsa_circ_0001675在头颈癌中的表达谱、临床应用及潜在抑癌机制

The Expression Profile, Clinical Application and Potential Tumor Suppressing Mechanism of hsa_circ_0001675 in Head and Neck Carcinoma.

作者信息

Cao Yujie, Ye Dong, Shen Zhisen, Li Zan, Li Qun, Rong Hao

机构信息

Department of Otorhinolaryngology Head and Neck Surgery, Lihuili Hospital Affiliated to Ningbo University, Ningbo, China.

Department of Otorhinolaryngology Head and Neck Surgery, Ningbo Medical Center Lihuili Hospital , Ningbo, China.

出版信息

Front Oncol. 2022 May 6;12:769666. doi: 10.3389/fonc.2022.769666. eCollection 2022.

Abstract

PURPOSE

This study sought to identify circular RNAs (circRNA) that participate in the regulation of head and neck cancer (HNC), analyze their clinical application, and predict their molecular mechanism during HNC.

MATERIALS AND METHODS

High-throughput sequencing was used to analyze circRNA expression in 18 matched HNC and adjacent normal tissues. Target circRNAs with significantly differential expression were obtained. In 103 HNC and adjacent normal tissues, real-time fluorescent quantitative PCR (qRT-PCR) was used to verify the differential expression of target circRNAs. This data was combined with clinicopathological information to analyze the diagnostic value of target circRNA. Bioinformatics was used to find target circRNAs that acted as competitive endogenous RNA (ceRNA) and construct a circRNA-miRNA-mRNA regulatory network. mRNA expression was verified by immunohistochemistry (IHC).

RESULTS

A total of 714 differentially expressed circRNAs were detected in HNC, and the low expression of hsa_circ_0001675 was particularly significant (fold change [FC] = -4.85, = 6.305E-05). hsa_circ_0001675 had significantly lower expression in HNC than in normal tissue ( < 0.01). Low hsa_circ_0001675 expression was positively associated with tumor invasion and clinical staging ( < 0.05), and its area under the ROC curve (AUC) was 0.7776. Low hsa_circ_0001675 expression also correlated with the overall survival (OS) rate and the progression-free survival (PFS) rate of HNC patients ( < 0.001). Bioinformatics was used to construct a ceRNA network of hsa_circ_0001675 with six differentially expressed miRNAs (hsa-miR-330-5p, hsa-miR-498, hsa-miR-532-3p, hsa-miR-577, hsa-miR-1248, and hsa-miR-1305) and 411 differentially expressed mRNAs and found that the neuroactive ligand-receptor interaction, and the cAMP and calcium signaling pathways were particularly enriched. Further bioinformatics and IHC analysis showed that miR577/TESC is the likely downstream signaling pathway for hsa_circ_0001675.

CONCLUSION

This study showed that hsa_circ_0001675 is downregulated in HNC and could be an effective biomarker for HNC diagnosis. In addition, hsa_circ_0001675 may have a potential ceRNA mechanism and suppress HNC disease progression through the hsa_circ_0001675-miRNA-mRNA axis.

摘要

目的

本研究旨在鉴定参与头颈部癌(HNC)调控的环状RNA(circRNA),分析其临床应用,并预测其在HNC发生过程中的分子机制。

材料与方法

采用高通量测序分析18对匹配的HNC组织及癌旁正常组织中的circRNA表达情况,获得具有显著差异表达的目标circRNA。在103例HNC组织及癌旁正常组织中,采用实时荧光定量PCR(qRT-PCR)验证目标circRNA的差异表达。将该数据与临床病理信息相结合,分析目标circRNA的诊断价值。利用生物信息学方法寻找作为竞争性内源性RNA(ceRNA)的目标circRNA,并构建circRNA-miRNA-mRNA调控网络。通过免疫组织化学(IHC)验证mRNA表达。

结果

在HNC中总共检测到714个差异表达的circRNA,其中hsa_circ_0001675的低表达尤为显著(折叠变化[FC]=-4.85,P=6.305E-05)。hsa_circ_0001675在HNC中的表达显著低于正常组织(P<0.01)。hsa_circ_0001675的低表达与肿瘤侵袭及临床分期呈正相关(P<0.05),其ROC曲线下面积(AUC)为0.7776。hsa_circ_0001675的低表达还与HNC患者的总生存率(OS)和无进展生存率(PFS)相关(P<0.001)。利用生物信息学方法构建了hsa_circ_0001675与6个差异表达的miRNA(hsa-miR-330-5p、hsa-miR-498、hsa-miR-532-3p、hsa-miR-577、hsa-miR-1248和hsa-miR-1305)以及411个差异表达的mRNA的ceRNA网络,发现神经活性配体-受体相互作用以及cAMP和钙信号通路显著富集。进一步的生物信息学和IHC分析表明,miR577/TESC可能是hsa_circ_0001675的下游信号通路。

结论

本研究表明hsa_circ_0001675在HNC中表达下调,可能是HNC诊断的有效生物标志物。此外,hsa_circ_0001675可能具有潜在的ceRNA机制,并通过hsa_circ_0001675-miRNA-mRNA轴抑制HNC疾病进展。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5483/9121769/7d250fb91c13/fonc-12-769666-g001.jpg

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