• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

嗜冷芽孢杆菌JHS1的全基因组序列

Complete Genome Sequence of Bacillus frigoritolerans JHS1.

作者信息

Shin Jun Hyeuk, Bömeke Mechthild, Poehlein Anja, Hollensteiner Jacqueline

机构信息

Genomic and Applied Microbiology and Göttingen Genomics Laboratory, Institute of Microbiology and Genetics, Georg-August University of Göttingen, Göttingen, Germany.

出版信息

Microbiol Resour Announc. 2022 Jun 16;11(6):e0018422. doi: 10.1128/mra.00184-22. Epub 2022 May 24.

DOI:10.1128/mra.00184-22
PMID:35608345
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9202377/
Abstract

Bacillus frigoritolerans JHS1 was isolated from the soil of a tomato plant (Solanum lycopersicum). The genome consists of one circular chromosome (5,552,463 bp) and a plasmid (16,118 bp) with an overall GC content of 40.57%. Using TYGS for taxonomic classification, strain JHS1 was assigned to the species .

摘要

耐冷芽孢杆菌JHS1是从番茄植株(番茄)的土壤中分离出来的。其基因组由一条环状染色体(5,552,463 bp)和一个质粒(16,118 bp)组成,总体GC含量为40.57%。使用TYGS进行分类,菌株JHS1被归类为该物种。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/90c7/9202377/33eaa3431a8a/mra.00184-22-f001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/90c7/9202377/33eaa3431a8a/mra.00184-22-f001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/90c7/9202377/33eaa3431a8a/mra.00184-22-f001.jpg

相似文献

1
Complete Genome Sequence of Bacillus frigoritolerans JHS1.嗜冷芽孢杆菌JHS1的全基因组序列
Microbiol Resour Announc. 2022 Jun 16;11(6):e0018422. doi: 10.1128/mra.00184-22. Epub 2022 May 24.
2
Reclassification of Brevibacterium frigoritolerans DSM 8801 as Bacillus frigoritolerans comb. nov. Based on Genome Analysis.根据基因组分析,将耐冷短杆菌 DSM 8801 重新分类为耐冷芽孢杆菌 comb. nov.
Curr Microbiol. 2020 Aug;77(8):1916-1923. doi: 10.1007/s00284-020-01964-x. Epub 2020 Apr 4.
3
Complete Genome Sequence of Brevibacterium frigoritolerans Ant232, Isolated from Antarctic Snow.从南极雪中分离的耐冷短杆菌Ant232的全基因组序列
Microbiol Resour Announc. 2022 May 19;11(5):e0015222. doi: 10.1128/mra.00152-22. Epub 2022 Apr 7.
4
Complete genome sequence of sp. strain R1, a bacterium isolated from tomato ().从番茄中分离出的细菌——sp. 菌株R1的全基因组序列。
Microbiol Resour Announc. 2024 Jul 18;13(7):e0024224. doi: 10.1128/mra.00242-24. Epub 2024 Jun 28.
5
Reclassification of as comb. nov. based on phylogenomics and multiple molecular synapomorphies.根据系统发育基因组学和多个分子共衍征,将 重新分类为 组合新种。
Int J Syst Evol Microbiol. 2022 May;72(5). doi: 10.1099/ijsem.0.005389.
6
Draft Genome Sequence of a Potential Organic Phosphorus-Degrading Bacterium Brevibacterium frigoritolerans GD44, Isolated from Radioactive Soil in Xinjiang, China.新疆放射性土壤中耐冷短杆菌 GD44 的潜在有机磷降解菌全基因组草图
Curr Microbiol. 2020 Oct;77(10):2896-2903. doi: 10.1007/s00284-020-02037-9. Epub 2020 Jul 10.
7
The complete genome sequence of Bacillus velezensis strain GH1-13 reveals agriculturally beneficial properties and a unique plasmid.韦氏芽孢杆菌 GH1-13 菌株的全基因组序列揭示了其具有农业有益特性和独特的质粒。
J Biotechnol. 2017 Oct 10;259:221-227. doi: 10.1016/j.jbiotec.2017.06.1206. Epub 2017 Jul 6.
8
Insights from the Complete Genome Sequence of Bacillus circulans GN03, a Plant Growth-Promoting Bacterium Isolated from Pak Choi Cabbage (Brassica chinensis L.) Root Surface.从圆形芽孢杆菌GN03全基因组序列中获得的见解,GN03是一种从小白菜(Brassica chinensis L.)根际分离的植物促生细菌。
Microbiol Resour Announc. 2020 Aug 20;9(34):e00581-20. doi: 10.1128/MRA.00581-20.
9
Complete genome and plasmid sequence of a novel sp. BD59S, a parasporal protein synthesizing bacterium.新型芽孢外蛋白质合成细菌sp. BD59S的全基因组和质粒序列
3 Biotech. 2019 Sep;9(9):318. doi: 10.1007/s13205-019-1849-7. Epub 2019 Aug 3.
10
Complete genome sequences of JNU 534, a potential food and feed preservative.JNU 534的全基因组序列,一种潜在的食品和饲料防腐剂。
J Anim Sci Technol. 2022 May;64(3):599-602. doi: 10.5187/jast.2022.e34. Epub 2022 May 31.

本文引用的文献

1
Plant growth promoting and antifungal asset of indigenous rhizobacteria secluded from saffron (Crocus sativus L.) rhizosphere.从藏红花(Crocus sativus L.)根际中分离出的土著根际细菌的促生长和抗真菌特性。
Microb Pathog. 2021 Jan;150:104734. doi: 10.1016/j.micpath.2021.104734. Epub 2021 Jan 8.
2
Evaluation of a Highly Efficient DNA Extraction Method for Endospores.一种用于芽孢的高效DNA提取方法的评估
Microorganisms. 2020 May 20;8(5):763. doi: 10.3390/microorganisms8050763.
3
Reclassification of Brevibacterium frigoritolerans DSM 8801 as Bacillus frigoritolerans comb. nov. Based on Genome Analysis.
根据基因组分析,将耐冷短杆菌 DSM 8801 重新分类为耐冷芽孢杆菌 comb. nov.
Curr Microbiol. 2020 Aug;77(8):1916-1923. doi: 10.1007/s00284-020-01964-x. Epub 2020 Apr 4.
4
TYGS is an automated high-throughput platform for state-of-the-art genome-based taxonomy.TYGS 是一个自动化的高通量平台,用于最先进的基于基因组的分类学。
Nat Commun. 2019 May 16;10(1):2182. doi: 10.1038/s41467-019-10210-3.
5
fastp: an ultra-fast all-in-one FASTQ preprocessor.fastp:一个超快速的一体化 FASTQ 预处理程序。
Bioinformatics. 2018 Sep 1;34(17):i884-i890. doi: 10.1093/bioinformatics/bty560.
6
Minimap2: pairwise alignment for nucleotide sequences.Minimap2:核苷酸序列的两两比对。
Bioinformatics. 2018 Sep 15;34(18):3094-3100. doi: 10.1093/bioinformatics/bty191.
7
Unicycler: Resolving bacterial genome assemblies from short and long sequencing reads.单轮循环器:从短读长和长读长测序数据中解析细菌基因组组装结果
PLoS Comput Biol. 2017 Jun 8;13(6):e1005595. doi: 10.1371/journal.pcbi.1005595. eCollection 2017 Jun.
8
NCBI prokaryotic genome annotation pipeline.美国国立生物技术信息中心原核生物基因组注释管道
Nucleic Acids Res. 2016 Aug 19;44(14):6614-24. doi: 10.1093/nar/gkw569. Epub 2016 Jun 24.
9
FastME 2.0: A Comprehensive, Accurate, and Fast Distance-Based Phylogeny Inference Program.FastME 2.0:一个全面、准确、快速的基于距离的系统发育推断程序。
Mol Biol Evol. 2015 Oct;32(10):2798-800. doi: 10.1093/molbev/msv150. Epub 2015 Jun 30.
10
Bandage: interactive visualization of de novo genome assemblies.绷带:从头基因组组装的交互式可视化
Bioinformatics. 2015 Oct 15;31(20):3350-2. doi: 10.1093/bioinformatics/btv383. Epub 2015 Jun 22.