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[植物环状RNA的研究进展]

[Progress in circular RNAs of plants].

作者信息

Chang Zhenzhen, Gong Guizhi, Peng Zhuchun, Yang Cheng, Hong Qibin

机构信息

Citrus Research Institute, Southwest University, Chongqing 400712, China.

出版信息

Sheng Wu Gong Cheng Xue Bao. 2022 May 25;38(5):1706-1723. doi: 10.13345/j.cjb.210823.

Abstract

With the development of high-throughput sequencing technology, circular RNAs (circRNAs) have gradually become a hotspot in the research on non-coding RNA. CircRNAs are produced by the covalent circularization of a downstream 3' splice donor and an upstream 5' splice acceptor through backsplicing, and they are pervasive in eukaryotic cells. CircRNAs used to be considered byproducts of false splicing, whereas an explosion of related studies in recent years has disproved this misconception. Compared with the rich studies of circRNAs in animals, the study of circRNAs in plants is still in its infancy. In this review, we introduced the discovery of plant circRNAs, the discovery of plant circRNAs, the circularization feature, expression specificity, conservation, and stability of plant circRNAs and expounded the identification tools, main types, and biogenesis mechanisms of circRNAs. Furthermore, we summarized the potential roles of plant circRNAs as microRNA (miRNA) sponges and translation templates and in response to biotic/abiotic stress, and briefed the degradation and localization of plant circRNAs. Finally, we discussed the challenges and proposed the future directions in the research on plant circRNAs.

摘要

随着高通量测序技术的发展,环状RNA(circRNAs)逐渐成为非编码RNA研究的热点。circRNAs是由下游3'剪接供体和上游5'剪接受体通过反向剪接进行共价环化产生的,它们在真核细胞中广泛存在。circRNAs曾被认为是错误剪接的副产物,然而近年来大量相关研究驳斥了这一误解。与动物中对circRNAs的丰富研究相比,植物中circRNAs的研究仍处于起步阶段。在这篇综述中,我们介绍了植物circRNAs的发现、环状化特征、表达特异性、保守性和稳定性,并阐述了circRNAs的鉴定工具、主要类型和生物发生机制。此外,我们总结了植物circRNAs作为微小RNA(miRNA)海绵和翻译模板以及在应对生物/非生物胁迫方面的潜在作用,并简要介绍了植物circRNAs的降解和定位。最后,我们讨论了植物circRNAs研究中的挑战并提出了未来的研究方向。

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