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本文引用的文献

1
A naturally inspired antibiotic to target multidrug-resistant pathogens.一种受自然启发的抗生素,用于靶向抗多种药物的病原体。
Nature. 2022 Jan;601(7894):606-611. doi: 10.1038/s41586-021-04264-x. Epub 2022 Jan 5.
2
Antibiotic resistance in the environment.环境中的抗生素耐药性。
Nat Rev Microbiol. 2022 May;20(5):257-269. doi: 10.1038/s41579-021-00649-x. Epub 2021 Nov 4.
3
Metagenome-Guided Analogue Synthesis Yields Improved Gram-Negative-Active Albicidin- and Cystobactamid-Type Antibiotics.基于宏基因组指导的类似物合成得到了改良的革兰氏阴性活性的 Albicidin 和 Cystobactamid 型抗生素。
Angew Chem Int Ed Engl. 2021 Oct 4;60(41):22172-22177. doi: 10.1002/anie.202104874. Epub 2021 Sep 7.
4
Synthetic-Bioinformatic Natural Product Antibiotics with Diverse Modes of Action.具有多种作用模式的合成生物信息天然产物抗生素。
J Am Chem Soc. 2020 Aug 19;142(33):14158-14168. doi: 10.1021/jacs.0c04376. Epub 2020 Aug 11.
5
Bioactive Synthetic-Bioinformatic Natural Product Cyclic Peptides Inspired by Nonribosomal Peptide Synthetase Gene Clusters from the Human Microbiome.受人类微生物组中非核糖体肽合成酶基因簇启发的生物活性合成-生物信息天然产物环肽。
J Am Chem Soc. 2019 Oct 9;141(40):15737-15741. doi: 10.1021/jacs.9b07317. Epub 2019 Sep 27.
6
Mapping Interactions of Microbial Metabolites with Human G-Protein-Coupled Receptors.绘制微生物代谢物与人源 G 蛋白偶联受体相互作用图谱。
Cell Host Microbe. 2019 Aug 14;26(2):273-282.e7. doi: 10.1016/j.chom.2019.07.002. Epub 2019 Aug 1.
7
Advances in microbial culturing conditions to activate silent biosynthetic gene clusters for novel metabolite production.微生物培养条件的进展,以激活沉默生物合成基因簇,用于新型代谢产物的生产。
J Ind Microbiol Biotechnol. 2019 Oct;46(9-10):1381-1400. doi: 10.1007/s10295-019-02198-y. Epub 2019 Jun 8.
8
Cadasides, Calcium-Dependent Acidic Lipopeptides from the Soil Metagenome That Are Active against Multidrug-Resistant Bacteria.土壤宏基因组来源的依赖钙的酸性脂肽类化合物,对多重耐药菌有活性。
J Am Chem Soc. 2019 Mar 6;141(9):3910-3919. doi: 10.1021/jacs.8b12087. Epub 2019 Feb 20.
9
The antiSMASH database version 2: a comprehensive resource on secondary metabolite biosynthetic gene clusters.反物质 SMASH 数据库版本 2:二次代谢生物合成基因簇的综合资源。
Nucleic Acids Res. 2019 Jan 8;47(D1):D625-D630. doi: 10.1093/nar/gky1060.
10
Antibiotic resistance: a rundown of a global crisis.抗生素耐药性:全球危机概览
Infect Drug Resist. 2018 Oct 10;11:1645-1658. doi: 10.2147/IDR.S173867. eCollection 2018.

生物信息学勘探和合成一种规避耐药性的双功能脂肽抗生素。

Bioinformatic prospecting and synthesis of a bifunctional lipopeptide antibiotic that evades resistance.

机构信息

Laboratory of Genetically Encoded Small Molecules, The Rockefeller University, New York, NY 10065, USA.

Center for Discovery and Innovation, Hackensack Meridian Health, Nutley, NJ 07110, USA.

出版信息

Science. 2022 May 27;376(6596):991-996. doi: 10.1126/science.abn4213. Epub 2022 May 26.

DOI:10.1126/science.abn4213
PMID:35617397
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10904332/
Abstract

Emerging resistance to currently used antibiotics is a global public health crisis. Because most of the biosynthetic capacity within the bacterial kingdom has remained silent in previous antibiotic discovery efforts, uncharacterized biosynthetic gene clusters found in bacterial genome-sequencing studies remain an appealing source of antibiotics with distinctive modes of action. Here, we report the discovery of a naturally inspired lipopeptide antibiotic called cilagicin, which we chemically synthesized on the basis of a detailed bioinformatic analysis of the biosynthetic gene cluster. Cilagicin's ability to sequester two distinct, indispensable undecaprenyl phosphates used in cell wall biosynthesis, together with the absence of detectable resistance in laboratory tests and among multidrug-resistant clinical isolates, makes it an appealing candidate for combating antibiotic-resistant pathogens.

摘要

目前使用的抗生素出现耐药性是全球公共健康危机。由于在以前的抗生素发现工作中,细菌王国的大多数生物合成能力一直处于沉默状态,因此在细菌基因组测序研究中发现的未被描述的生物合成基因簇仍然是具有独特作用模式的抗生素的有吸引力的来源。在这里,我们报告了一种天然灵感的脂肽抗生素的发现,称为西拉菌素,我们根据生物合成基因簇的详细生物信息学分析对其进行了化学合成。西拉菌素能够螯合两种不同的、不可缺少的十一碳烯磷酸,用于细胞壁生物合成,并且在实验室测试中和多药耐药临床分离株中均未检测到耐药性,这使其成为对抗抗药性病原体的有吸引力的候选药物。