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二倍体和四倍体在干旱胁迫下的转录组比较分析。

Comparative Analysis of Transcriptomes of Diploid and Tetraploid under Drought Stress.

机构信息

State Key Laboratory of Crop Biology, Shandong Agricultural University, Taian 271018, China.

College of Agronomy, Shandong Agricultural University, Taian 271018, China.

出版信息

Genes (Basel). 2022 May 13;13(5):873. doi: 10.3390/genes13050873.

Abstract

is a species of bioenergy crop unique to China. It is widely distributed in the south of China with high resistance to drought and salt stress. To date, the molecular mechanism of the adaption to drought stress in is little known. In this study, RNA-seq technology was employed to analyze the transcriptome changes of diploid and tetraploid after drought treatment. It was found that the number of differentially expressed genes in diploid was much higher than tetraploid, whereas the tetraploid may require fewer transcriptional changes. While the transcriptional changes in drought-tolerant tetraploid are less than that of diploid, more known drought-tolerant pathways were significantly enriched than drought-sensitive diploid . In addition, many drought-tolerance-related genes were constitutively and highly expressed in tetraploid under either normal condition or drought stress. These results together demonstrated that drought-tolerant tetraploid , on the one hand, may preadapt to drought by constitutively overexpressing a series of drought-tolerant genes and, on the other hand, may adapt to drought by actively inducing other drought-tolerant-related pathways. Overall, this study could deepen our understanding of the molecular mechanism of drought-tolerance in bioenergy plants.

摘要

是中国特有的一种生物能源作物。它在中国南方广泛分布,具有很强的抗旱和耐盐能力。迄今为止,对 的抗旱适应的分子机制还知之甚少。在这项研究中,我们采用 RNA-seq 技术分析了干旱处理后二倍体和四倍体 的转录组变化。结果发现,二倍体 的差异表达基因数量远高于四倍体,而四倍体 可能需要较少的转录变化。尽管耐旱性较强的四倍体 的转录变化小于二倍体,但与干旱敏感的二倍体 相比,更多已知的耐旱途径显著富集。此外,在正常条件或干旱胁迫下,许多与耐旱性相关的基因在四倍体中持续且高度表达。这些结果共同表明,耐旱性较强的四倍体 一方面可能通过组成性过表达一系列耐旱基因预先适应干旱,另一方面可能通过主动诱导其他耐旱相关途径来适应干旱。总的来说,本研究可以加深我们对生物能源植物耐旱性分子机制的理解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8614/9141248/75e8ba7688b2/genes-13-00873-g001.jpg

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