Department of Thoracic Surgery, The First Affiliated Hospital of Soochow University, Suzhou, 215006, China.
Institute of Thoracic Surgery, The First Affiliated Hospital of Soochow University, Suzhou, China.
BMC Cancer. 2022 May 30;22(1):589. doi: 10.1186/s12885-022-09685-z.
Cystatins are a class of proteins that can inhibit cysteine protease and are widely distributed in human bodily fluids and secretions. Cystatin SN (CST1), a member of the CST superfamily, is abnormally expressed in a variety of tumors. However, its effect on the occurrence and development of lung adenocarcinoma (LUAD) remains unclear.
We obtained transcriptome analysis data of CST1 from The Cancer Genome Atlas (TCGA) and GSE31210 databases. The association of CST1 expression with prognosis, gene mutations and tumor immune microenvironment was analyzed using public databases. Gene Ontology (GO), Kyoto Encyclopedia of Genes and Genomes (KEGG), and Gene Set Enrichment Analysis (GSEA) were performed to investigate the potential mechanisms of CST1.
In this study, we found that CST1 was highly expressed in lung adenocarcinoma and was associated with prognosis and tumor immune microenvironment. Genetic mutations of CST1 were shown to be related to disease-free survival (DFS) by using the c-BioPortal tool. Potential proteins binding to CST1 were identified by constructing a protein-protein interaction (PPI) network. Gene set enrichment analysis (GSEA) of CST1 revealed that CST1 was notably enriched in epithelial-mesenchymal transition (EMT). Cell experiments confirmed that overexpression of CST1 promoted lung adenocarcinoma cells migration and invasion, while knockdown of CST1 significantly inhibited lung adenocarcinoma cells migration and invasion.
Our comprehensive bioinformatics analyses revealed that CST1 may be a novel prognostic biomarker in LUAD. Experiments confirmed that CST1 promotes epithelial-mesenchymal transition in LUAD cells. These findings will help to better understand the distinct role of CST1 in LUAD.
胱抑素是一类能够抑制半胱氨酸蛋白酶的蛋白质,广泛分布于人体体液和分泌物中。胱抑素 SN(CST1)是 CST 超家族的成员,在多种肿瘤中异常表达。然而,其在肺腺癌(LUAD)发生发展中的作用尚不清楚。
我们从癌症基因组图谱(TCGA)和 GSE31210 数据库中获取了 CST1 的转录组分析数据。使用公共数据库分析 CST1 表达与预后、基因突变和肿瘤免疫微环境的关系。进行基因本体论(GO)、京都基因与基因组百科全书(KEGG)和基因集富集分析(GSEA),以研究 CST1 的潜在机制。
在这项研究中,我们发现 CST1 在肺腺癌中高表达,并与预后和肿瘤免疫微环境有关。使用 c-BioPortal 工具发现 CST1 的遗传突变与无病生存期(DFS)相关。通过构建蛋白质-蛋白质相互作用(PPI)网络,鉴定出与 CST1 潜在结合的蛋白质。CST1 的基因集富集分析(GSEA)显示,CST1 在上皮-间充质转化(EMT)中明显富集。细胞实验证实,CST1 的过表达促进肺腺癌细胞的迁移和侵袭,而 CST1 的敲低则显著抑制肺腺癌细胞的迁移和侵袭。
我们的综合生物信息学分析表明,CST1 可能是 LUAD 的一种新的预后生物标志物。实验证实,CST1 促进 LUAD 细胞中的上皮-间充质转化。这些发现将有助于更好地理解 CST1 在 LUAD 中的独特作用。