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胎盘如何促进高海拔人群的成功繁殖:适应与习服的转录组比较。

How Placenta Promotes the Successful Reproduction in High-Altitude Populations: A Transcriptome Comparison between Adaptation and Acclimatization.

机构信息

The Key Laboratory of Precision and Genomic Medicine, Chinese Academy of Sciences; Beijing Institute of Genomics (China National Center for Bioinformation), University of Chinese Academy of Sciences, Beijing, China.

Beijing Advanced Innovation Centre for Biomedical Engineering, Key Laboratory for Biomechanics and Mechanobiology of Ministry of Education, School of Engineering Medicine, Beihang University, Beijing, China.

出版信息

Mol Biol Evol. 2022 Jun 2;39(6). doi: 10.1093/molbev/msac120.

Abstract

As the best adapted high altitude population, Tibetans feature a relatively high offspring survival rate. Genome-wide studies have identified hundreds of candidate SNPs related to high altitude adaptation of Tibetans, although most of them have unknown functional relevance. To explore the mechanisms behind successful reproduction at high altitudes, we compared the placental transcriptomes of Tibetans, sea level Hans (SLHan), and Han immigrants (ImHan). Among the three populations, placentas from ImHan showed a hyperactive gene expression pattern. Their increased activation demonstrates a hypoxic stress response similar to sea level individuals experiencing hypoxic conditions. Unlike ImHan, Tibetan placentas were characterized by the significant up-regulation of placenta-specific genes, and the activation of autophagy and the tricarboxylic acid (TCA) cycle. Certain conserved hypoxia response functions, including the antioxidant system and angiogenesis, were activated in both ImHan and Tibetans, but mediated by different genes. The coherence of specific transcriptome features linked to possible genetic contribution was observed in Tibetans. Furthermore, we identified a novel Tibetan-specific EPAS1 isoform with a partial deletion at exon six, which may be involved in the adaption to hypoxia through the EPAS1-centred gene network in the placenta. Overall, our results show that the placenta grants successful pregnancies in Tibetans by strengthening the natural functions of the placenta itself. On the other hand, the placenta of ImHan was in an inhabiting time-dependent acclimatization process representing a common hypoxic stress response pattern.

摘要

作为适应高海拔环境最好的人群,藏民具有较高的后代成活率。全基因组研究已经鉴定出数百个与藏民高原适应相关的候选单核苷酸多态性,尽管其中大多数的功能相关性尚不清楚。为了探索高海拔地区成功繁殖的机制,我们比较了藏民、海平面汉族(SLHan)和汉族移民(ImHan)的胎盘转录组。在这三个群体中,ImHan 的胎盘表现出高度活跃的基因表达模式。其过度激活表明存在类似于海平面人群在缺氧条件下的缺氧应激反应。与 ImHan 不同,藏民的胎盘以胎盘特异性基因的显著上调为特征,同时还激活了自噬和三羧酸(TCA)循环。某些保守的缺氧反应功能,包括抗氧化系统和血管生成,在 ImHan 和藏民中都被激活,但由不同的基因介导。在藏民中观察到与可能的遗传贡献相关的特定转录组特征的一致性。此外,我们鉴定出一种新型的藏民特有的 EPAS1 异构体,其第六外显子部分缺失,可能通过胎盘内以 EPAS1 为中心的基因网络参与缺氧适应。总的来说,我们的研究结果表明,胎盘通过增强自身的天然功能,为藏民的成功妊娠提供保障。另一方面,ImHan 的胎盘处于一种定居的、时间依赖性的适应过程中,代表了一种常见的缺氧应激反应模式。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8325/9206416/8c3b2c85ce88/msac120f1.jpg

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