Pan Chenxi, Luo Nan, Guo Kun, Wang Wenbo, Li Lei, Fan Ning, Tian Yu
Department of Breast Surgery, The Second Hospital of Dalian Medical University, Dalian, China.
Department of Infection, The Second Hospital of Dalian Medical University, Dalian, China.
Front Genet. 2022 May 23;13:887925. doi: 10.3389/fgene.2022.887925. eCollection 2022.
Liver cancer is the fifth most prevalent malignant tumor, while hepatocellular carcinoma represents the most prevalent subtype worldwide. Previous studies have associated the chromobox family, critical components of epigenetic regulatory complexes, with development of many malignancies owing to their role in inhibiting differentiation and promoting proliferation of cancer cells. However, little is known regarding their function in development and progression of hepatocellular carcinoma. In the present study, we analyzed differential expression, prognostic value, immune cell infiltration, and gene pathway enrichment of chromobox family in hepatocellular carcinoma patients. Next, we performed Pearson's correlation analysis to determine the relationships between chromobox family proteins with tumor-immune infiltration. Results revealed that high expression of CBX1, CBX2, CBX3, CBX6, and CBX8 was associated with poor survival rates of hepatocellular carcinoma patients. These five factors were used to build prognostic gene models using LASSO Cox regression analysis. Results indicated that high expression of CBX2 and CBX3 proteins was significantly associated with poor prognosis for hepatocellular carcinoma patients. The resulting nomogram revealed that CBX3 and T stages were significantly correlated with prognosis of hepatocellular carcinoma patients. Notably, predictive CBX3 was strongly correlated with immune cell infiltration. Furthermore, results from functional enrichment analysis revealed that CBX3 was mainly involved in regulation of methylation of Histone H3-K27. Collectively, these findings suggest that CBX3 could be a biomarker for predicting prognosis of hepatocellular carcinoma patients.
肝癌是第五大常见恶性肿瘤,而肝细胞癌是全球最常见的亚型。先前的研究已将表观遗传调控复合物的关键成分染色质盒家族与许多恶性肿瘤的发生联系起来,因为它们在抑制癌细胞分化和促进癌细胞增殖中发挥作用。然而,关于它们在肝细胞癌发生和发展中的功能知之甚少。在本研究中,我们分析了肝细胞癌患者中染色质盒家族的差异表达、预后价值、免疫细胞浸润和基因通路富集情况。接下来,我们进行了Pearson相关性分析,以确定染色质盒家族蛋白与肿瘤免疫浸润之间的关系。结果显示,CBX1、CBX2、CBX3、CBX6和CBX8的高表达与肝细胞癌患者的低生存率相关。利用这五个因素,通过LASSO Cox回归分析构建了预后基因模型。结果表明,CBX2和CBX3蛋白的高表达与肝细胞癌患者的不良预后显著相关。所得的列线图显示,CBX3和T分期与肝细胞癌患者的预后显著相关。值得注意的是,预测性的CBX3与免疫细胞浸润密切相关。此外,功能富集分析结果显示,CBX3主要参与组蛋白H3-K27甲基化的调控。总的来说,这些发现表明CBX3可能是预测肝细胞癌患者预后的生物标志物。