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自制六色荧光多重检测板的法医学效率评估及两个藏族群体群体遗传结构的深入剖析

Forensic Efficiency Estimation of a Homemade Six-Color Fluorescence Multiplex Panel and In-Depth Anatomy of the Population Genetic Architecture in Two Tibetan Groups.

作者信息

Liu Yanfang, Cui Wei, Jin Xiaoye, Wang Kang, Mei Shuyan, Zheng Xingkai, Zhu Bofeng

机构信息

Guangzhou Key Laboratory of Forensic Multi-Omics for Precision Identification, School of Forensic Medicine, Southern Medical University, Guangzhou, China.

Laboratory of Fundamental Nursing Research, School of Nursing, Guangdong Medical University, Dongguan, China.

出版信息

Front Genet. 2022 May 27;13:880346. doi: 10.3389/fgene.2022.880346. eCollection 2022.

Abstract

The genetic information of the Chinese Tibetan group has been a long-standing research hotspot among population geneticists and archaeologists. Herein, 309 unrelated individuals from two Tibetan groups living in Qinghai Province, China (CTQ), and Tibet Autonomous Region, China (CTT), were successfully genotyped using a new homemade six-color fluorescence multiplex panel, which contained 59 autosomal deletion/insertion polymorphisms (au-DIPs), two mini short tandem repeats (miniSTRs), two Y-chromosomal DIPs, and one Amelogenin. The cumulative probability of matching and combined power of exclusion values for this new panel in CTQ and CTT groups were 1.9253E-27 and 0.99999729, as well as 1.5061E-26 and 0.99999895, respectively. Subsequently, comprehensive population genetic analyses of Tibetan groups and reference populations were carried out based on the 59 au-DIPs. The multitudinous statistical analysis results supported that Tibetan groups have close genetic affinities with East Asian populations. These findings showed that this homemade system would be a powerful tool for forensic individual identification and paternity testing in Chinese Tibetan groups and give us an important insight for further perfecting the genetic landscape of Tibetan groups.

摘要

藏族群体的遗传信息一直是群体遗传学家和考古学家长期关注的研究热点。在此,使用一种新的自制六色荧光多重检测板,成功对来自中国青海省的两个藏族群体(CTQ)和中国西藏自治区的两个藏族群体(CTT)的309名无关个体进行了基因分型,该检测板包含59个常染色体缺失/插入多态性(au-DIPs)、两个微型短串联重复序列(miniSTRs)、两个Y染色体DIPs和一个牙釉蛋白基因。该新检测板在CTQ和CTT群体中的匹配累积概率和联合排除能力值分别为1.9253E-27和0.99999729,以及1.5061E-26和0.99999895。随后,基于59个au-DIPs对藏族群体和参考群体进行了全面的群体遗传学分析。众多统计分析结果支持藏族群体与东亚人群具有密切的遗传亲缘关系。这些发现表明,这种自制系统将成为中国藏族群体法医个体识别和亲子鉴定的有力工具,并为进一步完善藏族群体的遗传图谱提供重要见解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cef8/9184685/aa6d39a4505b/fgene-13-880346-g001.jpg

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