Psychiatry Department and Mental Health Institute of the Second Xiangya Hospital, Central South University, Changsha, Hunan, China.
National Clinical Research Center on Mental Disorders and National Technology Institute on Mental Disorders, Changsha, Hunan, China.
Sci Rep. 2022 Jun 13;12(1):9803. doi: 10.1038/s41598-022-13764-3.
CD47 performs a vital function in cancer therapy by binding to different SIRPα, thrombospondin 1, and integrin. However, its role in tumor immunity and its correlation with prognosis among many cancer types remain unknown. The raw mRNA expression data of CD47 in cancer patients was downloaded from TCGA and GTEx datasets. The protein expression of CD47 was detected using a microarray. Kaplan Meier analysis and forest plot were performed to compare the effects of high and low expression of CD47 on overall survival in different cancers. In addition, the correlations between CD47 expression and immune cell infiltration, stromal components, immune checkpoint genes, tumor mutational burden (TMB), and microsatellite instability (MSI) were analyzed from the public database. The gene function was determined by Gene Set Enrichment Analysis (GSEA). The expressions of CD47 in CHOL, COAD, ESCA, HNSC, KIRC, STAD, and THCA were higher compared with normal tissues. Elevated expression of CD47 predicted poor prognosis in ACC, KICH, KIRP, LGG, PAAD and UCEC. CD47 expression was strongly associated with immune infiltrating cells among KICH, KIRP, LGG, and PAAD. In addition, significant positive correlations with most immune checkpoint genes including PDCD 1 (PD-1), CD274 (PD-L1), CTLA4 in BLCA, DLBC, KICH, KIRC, LUAD, LUSC, PAAD, PCPG, SKCM, STAD, UCEC, and UVM was noted for the expression of CD47. GSEA analysis demonstrated that CD47 was a key regulator in metabolism-related pathways. These findings provide novel evidence that CD47 could be utilized as a promising prognostic biomarker and combination treatment target in various cancers.
CD47 在癌症治疗中通过与不同的 SIRPα、血小板反应蛋白 1 和整合素结合发挥重要作用。然而,其在肿瘤免疫中的作用及其与多种癌症类型预后的相关性尚不清楚。从 TCGA 和 GTEx 数据集下载了癌症患者 CD47 的原始 mRNA 表达数据。使用微阵列检测 CD47 的蛋白表达。进行 Kaplan-Meier 分析和森林图,以比较 CD47 高表达和低表达对不同癌症总体生存率的影响。此外,还从公共数据库分析了 CD47 表达与免疫细胞浸润、基质成分、免疫检查点基因、肿瘤突变负担(TMB)和微卫星不稳定性(MSI)的相关性。通过基因集富集分析(GSEA)确定基因功能。CHOL、COAD、ESCA、HNSC、KIRC、STAD 和 THCA 中的 CD47 表达高于正常组织。ACC、KICH、KIRP、LGG、PAAD 和 UCEC 中 CD47 的高表达预示着预后不良。CD47 表达与 KICH、KIRP、LGG 和 PAAD 中的免疫浸润细胞密切相关。此外,CD47 的表达与 BLCA、DLBC、KICH、KIRC、LUAD、LUSC、PAAD、PCPG、SKCM、STAD、UCEC 和 UVM 中的大多数免疫检查点基因,包括 PDCD1(PD-1)、CD274(PD-L1)和 CTLA4 呈显著正相关。GSEA 分析表明 CD47 是代谢相关途径的关键调节因子。这些发现为 CD47 可作为各种癌症有前途的预后生物标志物和联合治疗靶点提供了新的证据。