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嗜热栖热菌属:实现工业可持续发展的多功能糖苷水解酶(GHs)的宝贵宝库。

Genus Thermotoga: A valuable home of multifunctional glycoside hydrolases (GHs) for industrial sustainability.

作者信息

Akram Fatima, Haq Ikram Ul, Shah Fatima Iftikhar, Aqeel Amna, Ahmed Zeeshan, Mir Azka Shahzad, Qureshi Sumbal Sajid, Raja Saleha Ibadat

机构信息

Institute of Industrial Biotechnology, Government College University, Lahore 54000, Pakistan.

Institute of Industrial Biotechnology, Government College University, Lahore 54000, Pakistan; Pakistan Academy of Science, Islamabad, Pakistan.

出版信息

Bioorg Chem. 2022 Oct;127:105942. doi: 10.1016/j.bioorg.2022.105942. Epub 2022 Jun 10.

Abstract

Nature is a dexterous and prolific chemist for cataloging a number of hostile niches that are the ideal residence of various thermophiles. Apart from having other species, these subsurface environments are considered a throne of bacterial genus Thermotoga. The genome sequence of Thermotogales encodes complex and incongruent clusters of glycoside hydrolases (GHs), which are superior to their mesophilic counterparts and play a prominent role in various applications due to their extreme intrinsic stability. They have a tremendous capacity to use a wide variety of simple and multifaceted carbohydrates through GHs, formulate fermentative hydrogen and bioethanol at extraordinary yield, and catalyze high-temperature reactions for various biotechnological applications. Nevertheless, no stringent rules exist for the thermo-stabilization of biocatalysts present in the genus Thermotoga. These enzymes endure immense attraction in fundamental aspects of how these polypeptides attain and stabilize their distinctive three-dimensional (3D) structures to accomplish their physiological roles. Moreover, numerous genome sequences from Thermotoga species have revealed a significant fraction of genes most closely related to those of archaeal species, thus firming a staunch belief of lateral gene transfer mechanism. However, the question of its magnitude is still in its infancy. In addition to GHs, this genus is a paragon of encapsulins which carry pharmacological and industrial significance in the field of life sciences. This review highlights an intricate balance between the genomic organizations, factors inducing the thermostability, and pharmacological and industrial applications of GHs isolated from genus Thermotoga.

摘要

自然界是一位技艺娴熟且多产的化学家,它创造了许多恶劣的生态位,而这些生态位正是各种嗜热菌的理想栖息地。除了有其他物种外,这些地下环境被认为是嗜热栖热菌属的“宝座”。嗜热栖热菌目的基因组序列编码了复杂且不一致的糖苷水解酶(GHs)簇,这些酶比它们的嗜温同类更具优势,并且由于其极高的内在稳定性,在各种应用中发挥着重要作用。它们通过糖苷水解酶具有利用多种简单和复杂碳水化合物的巨大能力,能以极高的产量产生发酵性氢气和生物乙醇,并催化高温反应以用于各种生物技术应用。然而,对于嗜热栖热菌属中存在的生物催化剂的热稳定化,并没有严格的规则。这些酶在这些多肽如何获得并稳定其独特的三维(3D)结构以完成其生理功能的基本方面,具有极大的吸引力。此外,来自嗜热栖热菌物种的许多基因组序列显示,很大一部分基因与古菌物种的基因关系最为密切,从而坚定了对横向基因转移机制的坚信。然而,其规模问题仍处于起步阶段。除了糖苷水解酶外,该属还是封装蛋白的典范,封装蛋白在生命科学领域具有药理学和工业意义。本综述强调了从嗜热栖热菌属分离的糖苷水解酶的基因组组织、诱导热稳定性的因素以及药理学和工业应用之间的复杂平衡。

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