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宏基因组分析揭示了南极半岛不同区域的土壤微生物多样性。

Macrogenomic Analysis Reveals Soil Microbial Diversity in Different Regions of the Antarctic Peninsula.

作者信息

Qu Jiangyong, Lu Xiaofei, Liu Tianyi, Qu Ying, Xing Zhikai, Wang Shuang, Jing Siluo, Zheng Li, Wang Lijun, Wang Xumin

机构信息

College of Life Science, Yantai University, Yantai 264005, China.

First Institute of Oceanography, Ministry of Natural Resources, Qingdao 266061, China.

出版信息

Microorganisms. 2024 Nov 27;12(12):2444. doi: 10.3390/microorganisms12122444.

Abstract

(1) Background: The unique geographical and climatic conditions of the Antarctic Peninsula contribute to distinct regional ecosystems. Microorganisms are crucial for sustaining the local ecological equilibrium. However, the variability in soil microbial community diversity across different regions of the Antarctic Peninsula remains underexplored. (2) Methods: We utilized metagenome sequencing to investigate the composition and functionality of soil microbial communities in four locations: Devil Island, King George Island, Marambio Station, and Seymour Island. (3) Results: In the KGI region, we observed increased abundance of bacteria linked to plant growth promotion and the degradation of pollutants, including PAHs. Conversely, Marambio Station exhibited a significant reduction in bacterial abundance associated with iron and sulfur oxidation/reduction. Notably, we identified 94 antibiotic resistance genes (ARGs) across 15 classes of antibiotics in Antarctic soils, with those related to aminoglycosides, β-lactamase, ribosomal RNA methyltransferase, antibiotic efflux, gene regulatory resistance, and ABC transporters showing a marked influence from anthropogenic activities. (4) Conclusions: This study carries substantial implications for the sustainable use, advancement, and conservation of microbial resources in Antarctic soils.

摘要

(1) 背景:南极半岛独特的地理和气候条件造就了独特的区域生态系统。微生物对于维持当地生态平衡至关重要。然而,南极半岛不同区域土壤微生物群落多样性的变异性仍未得到充分探索。(2) 方法:我们利用宏基因组测序来研究四个地点(魔鬼岛、乔治王岛、马尔维纳斯站和西摩岛)土壤微生物群落的组成和功能。(3) 结果:在乔治王岛地区,我们观察到与植物生长促进和污染物(包括多环芳烃)降解相关的细菌丰度增加。相反,马尔维纳斯站与铁和硫氧化/还原相关的细菌丰度显著降低。值得注意的是,我们在南极土壤中鉴定出了15类抗生素中的94个抗生素抗性基因(ARG),其中与氨基糖苷类、β-内酰胺酶、核糖体RNA甲基转移酶、抗生素外排、基因调控抗性和ABC转运蛋白相关的基因受人为活动影响显著。(4) 结论:本研究对南极土壤微生物资源的可持续利用、开发和保护具有重要意义。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/59b3/11677454/7037b1f5284a/microorganisms-12-02444-g001.jpg

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