Behavioral Genetics of Addiction Laboratory, Department of Psychology at Emory University, Atlanta, GA 30322, USA.
Providence Veterans Affairs Medical Center, Department of Psychiatry and Human Behavior, Brown University, Providence, RI 02908, USA.
Genes (Basel). 2022 Jun 10;13(6):1045. doi: 10.3390/genes13061045.
Opiate/opioid use disorder (OUD) is a chronic relapsing brain disorder that has increased in prevalence in the last two decades in the United States. Understanding the molecular correlates of OUD may provide key insights into the pathophysiology of this syndrome. Using publicly available RNA-sequencing data, our study investigated the possible role of alternative mRNA splicing in human brain tissue (dorsal-lateral prefrontal cortex (dlPFC), nucleus accumbens (NAc), and midbrain) of 90 individuals with OUD or matched controls. We found a total of 788 differentially spliced genes across brain regions. Alternative mRNA splicing demonstrated mostly tissue-specific effects, but a functionally characterized splicing change in the clathrin and AP-2-binding (CLAP) domain of the Bridging Integrator 1 () gene was significantly linked to OUD across all brain regions. We investigated two hypotheses that may underlie differential splicing in OUD. First, we tested whether spliceosome genes were disrupted in the brains of individuals with OUD. Pathway enrichment analyses indicated spliceosome perturbations in OUD across brain regions. Second, we tested whether alternative mRNA splicing regions were linked to genetic predisposition. Using a genome-wide association study (GWAS) of OUD, we found no evidence that DNA variants within or surrounding differentially spliced genes were implicated in the heritability of OUD. Altogether, our study contributes to the understanding of OUD pathophysiology by providing evidence of a possible role of alternative mRNA splicing in OUD.
阿片类/类阿片使用障碍(OUD)是一种慢性复发性脑部疾病,在美国过去二十年中其患病率有所增加。了解 OUD 的分子相关性可能为该综合征的病理生理学提供关键见解。本研究使用公开的 RNA 测序数据,研究了替代性 mRNA 剪接在 90 名 OUD 患者或匹配对照者的人脑组织(背外侧前额叶皮层(dlPFC)、伏隔核(NAc)和中脑)中的可能作用。我们在整个大脑区域中发现了总共 788 个差异剪接基因。替代性 mRNA 剪接主要表现出组织特异性效应,但 Bridging Integrator 1 () 基因的网格蛋白和 AP-2 结合 (CLAP) 结构域的功能特征性剪接变化与所有大脑区域的 OUD 显著相关。我们研究了两个可能导致 OUD 中差异剪接的假设。首先,我们测试了 OUD 患者大脑中的剪接体基因是否受到干扰。通路富集分析表明,OUD 中大脑区域存在剪接体扰动。其次,我们测试了替代性 mRNA 剪接区域是否与遗传易感性有关。我们使用 OUD 的全基因组关联研究(GWAS),发现没有证据表明差异剪接基因内或周围的 DNA 变异与 OUD 的遗传性有关。总之,我们的研究通过提供替代性 mRNA 剪接在 OUD 中的可能作用的证据,为 OUD 病理生理学的理解做出了贡献。