Biochemical Research Scientific Association, Chair and Department of Biochemistry, Medical University of Warsaw, 02-097 Warsaw, Poland.
Chair and Department of Biochemistry, Medical University of Warsaw, 02-097 Warsaw, Poland.
Int J Mol Sci. 2022 Jun 13;23(12):6600. doi: 10.3390/ijms23126600.
Sixteen new Ciprofloxacin derivatives were designed and successfully synthesized. In an in silico experiment, lipophilicity was established for obtained compounds. All compounds were screened for antimicrobial activity using standard and clinical strains. As for Gram-positive hospital microorganisms, all tested derivatives were active. Measured MICs were in the range 1-16 µg/mL, confirming high antimicrobial potency. Derivative demonstrated activity against all standard Gram-positive , within the range of 0.8-1.6 µg/mL and was confirmed as the leading structure with MICs 1 µg/mL for KR 4358 and T 5591 (clinical strains). All compounds were screened for their in vitro cytotoxic properties via the MTT method. Three of the examined compounds (, and ) showed good activity against cancer cells, and in parallel were found not to be cytotoxic toward normal cells. Doxorubicin SI ranged 0.14-1.11 while the mentioned three ranged 1.9-3.4. Selected Ciprofloxacin derivatives were docked into the crystal structure of topoisomerase II (DNA gyrase) in complex with DNA (PDB ID: 5BTC). In summary, leading structures were established (, , and ). We have observed poor results in preformed studies for disubstituted derivatives, suggesting that 3-oxo-4-carboxylic acid core is the active DNA-gyrase binding site, and when structural changes were made in this fragment, there was an observed decrease in antibacterial potency.
设计并成功合成了 16 种新型环丙沙星衍生物。在计算机模拟实验中,确定了所得化合物的亲脂性。使用标准和临床菌株对所有化合物进行了抗菌活性筛选。对于革兰氏阳性医院微生物,所有测试的衍生物均具有活性。测量的 MIC 值在 1-16 µg/mL 范围内,证实了高抗菌效力。衍生物 对所有标准革兰氏阳性菌均表现出活性,MIC 值在 0.8-1.6 µg/mL 范围内,被确认为对 KR 4358 和 T 5591(临床株)具有 MIC 值为 1 µg/mL 的主导结构。通过 MTT 法筛选所有化合物的体外细胞毒性特性。三种被检查的化合物(、和 )对癌细胞具有良好的活性,并且同时对正常细胞没有细胞毒性。阿霉素 SI 范围为 0.14-1.11,而上述三种化合物的 SI 范围为 1.9-3.4。选择的环丙沙星衍生物被对接到拓扑异构酶 II(DNA 回旋酶)与 DNA 的晶体结构中(PDB ID:5BTC)。总之,确定了主导结构(、、和 )。我们在预先形成的二取代衍生物研究中观察到了较差的结果,表明 3-氧代-4-羧酸核心是活性 DNA-回旋酶结合位点,并且当该片段的结构发生变化时,观察到抗菌效力下降。