Naveed Muhammad, Yaseen Allah Rakha, Khalid Hira, Ali Urooj, Rabaan Ali A, Garout Mohamed, Halwani Muhammad A, Al Mutair Abbas, Alhumaid Saad, Al Alawi Zainab, Alhashem Yousef N, Ahmed Naveed, Yean Chan Yean
Department of Biotechnology, Faculty of Life Sciences, University of Central Punjab, Lahore 54000, Pakistan.
Department of Medical Education, King Edward Medical University, Lahore 54000, Pakistan.
Vaccines (Basel). 2022 May 29;10(6):869. doi: 10.3390/vaccines10060869.
Human Parainfluenza Virus (HPIV) Type-1, which is an anti-sense ribonucleic acid (RNA) virus belonging to the paramyxoviridae family, induces upper and lower respiratory tract infections. The infections caused by the HPIV Type-1 virus are usually confined to northwestern regions of America. HPIV-1 causes infections through the virulence of the hemagglutinin-neuraminidase (HN) protein, which plays a key role in the attachment of the viral particle with the host's receptor cells. To the best of our knowledge, there is no effective antiviral drugs or vaccines being developed to combat the infection caused by HPIV-1. In the current study, a multiple epitope-based vaccine was designed against HPIV-1 by taking the viral HN protein as a probable vaccine candidate. The multiple epitopes were selected in accordance with their allergenicity, antigenicity and toxicity scoring. The determined epitopes of the HN protein were connected simultaneously using specific conjugates along with an adjuvant to construct the subunit vaccine, with an antigenicity score of 0.6406. The constructed vaccine model was docked with various Toll-like Receptors (TLRs) and was computationally cloned in a pET28a (+) vector to analyze the expression of vaccine sequence in the biological system. Immune stimulations carried out by the C-ImmSim Server showed an excellent result of the body's defense system against the constructed vaccine model. The AllerTop tool predicted that the construct was non-allergen with and without the adjuvant sequence, and the VaxiJen 2.0 with 0.4 threshold predicted that the construct was antigenic, while the Toxinpred predicted that the construct was non-toxic. Protparam results showed that the selected protein was stable with 36.48 instability index (II) scores. The Grand average of Hydropathicity or GRAVY score indicated that the constructed protein was hydrophilic in nature. Aliphatic index values (93.53) confirmed that the construct was thermostable. This integrated computational approach shows that the constructed vaccine model has a potential to combat laryngotracheobronchitis infections caused by HPIV-I.
1型人副流感病毒(HPIV)是一种属于副粘病毒科的反义核糖核酸(RNA)病毒,可引起上呼吸道和下呼吸道感染。1型HPIV病毒引起的感染通常局限于美国西北部地区。HPIV-1通过血凝素神经氨酸酶(HN)蛋白的毒力引发感染,该蛋白在病毒颗粒与宿主受体细胞的附着过程中起关键作用。据我们所知,目前尚未开发出有效的抗病毒药物或疫苗来对抗由HPIV-1引起的感染。在当前的研究中,以病毒HN蛋白作为可能的疫苗候选物,设计了一种基于多表位的1型HPIV疫苗。根据其致敏性、抗原性和毒性评分选择多个表位。使用特定的连接物和佐剂同时连接确定的HN蛋白表位,构建亚单位疫苗,其抗原性评分为0.6406。将构建的疫苗模型与各种Toll样受体(TLR)对接,并在pET28a(+)载体中进行计算克隆,以分析疫苗序列在生物系统中的表达。C-ImmSim服务器进行的免疫刺激显示,机体防御系统对构建的疫苗模型产生了良好的反应。AllerTop工具预测,无论有无佐剂序列,构建物均无致敏性,阈值为0.4的VaxiJen 2.0预测构建物具有抗原性,而Toxinpred预测构建物无毒。Protparam结果显示,所选蛋白质的不稳定指数(II)评分为36.48,较为稳定。亲水性总平均值或GRAVY评分表明,构建的蛋白质具有亲水性。脂肪族指数值(93.53)证实构建物具有热稳定性。这种综合计算方法表明,构建的疫苗模型有可能对抗由HPIV-1引起的喉气管支气管炎感染。